Pairwise Alignments

Query, 314 a.a., Carnitine uptake ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 312 a.a., glycine-betaine-binding protein from Sinorhizobium meliloti 1021

 Score =  254 bits (649), Expect = 2e-72
 Identities = 127/285 (44%), Positives = 176/285 (61%), Gaps = 2/285 (0%)

Query: 24  AAEPAACKNVRLGVVNWTDVIATSAMAQVLLDGLGYQTKQTSASQQIIFAGIRDKRLDMF 83
           AAEP +CK VR   V WTD+ +T+A+A  +L+ LGY  +    S  + +A +++K +D++
Sbjct: 21  AAEPESCKTVRFSDVGWTDITSTTAVASTILEALGYAPQSKLLSIPVTYASMKNKDIDVY 80

Query: 84  LGYWNPIMTQTITPFVDANQFKVLDKPSLEDARATLAVPKYLYDKGLKTFADIHKFEKEL 143
           LG W P M     PF++    +V+  P+L  A+ T AVPKY+ D G+K  +D+ KF  + 
Sbjct: 81  LGDWQPSMEADRKPFLEDKSIEVIG-PNLTGAKYTFAVPKYVADAGVKDISDLQKFPDKF 139

Query: 144 GGKIYGIEPGSGANTQIKAMITKNQFDLGKFQLVESSEAGMLAAVDRAVRRKEAVVFFGW 203
           G KIYGIEPG+  N  I  MI K  F L  ++LVESSE GMLA V+RA +  + +VF GW
Sbjct: 140 GRKIYGIEPGNNGNRMILDMINKGDFGLTGWELVESSEQGMLAEVERATKDDQWIVFLGW 199

Query: 204 APHPMNVNIDMAYLGDSQDALGPDEGRATVWTVTAPDYAERCPNALRLLANLKFSAEDES 263
           APHPMN    + YL  +    GP+ G A ++T     YA+ CPN  R + NL+F+ E E+
Sbjct: 200 APHPMNTRYQIDYLSGADAYFGPNYGGADIYTNIRAGYAQECPNVARFVTNLRFTLEMEN 259

Query: 264 RMMQPLL-DHKDALESARQWLKDHPEDKARWLEGVTTFDGKPAAD 307
            +M  +L D  D  ++A  WLK HPE  A WLEGVTTFDG PA +
Sbjct: 260 EIMNGILNDGNDPKDAAADWLKAHPEAVAPWLEGVTTFDGAPAKE 304