Pairwise Alignments

Query, 368 a.a., AraC-family transcriptional regulator from Pseudomonas putida KT2440

Subject, 334 a.a., transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

 Score =  283 bits (725), Expect = 4e-81
 Identities = 141/329 (42%), Positives = 212/329 (64%), Gaps = 4/329 (1%)

Query: 5   TSGNPTQNRTTPQSI---GFLLLDNFTLISLASAVEPLRMANQLSGRELYRWHTLTIDGG 61
           T   PT +  T   I    F+LLD+F+++S ASA+E LR+AN++ GRE+Y W  L   G 
Sbjct: 3   TQSKPTTSPATGPQIRRYAFVLLDSFSMLSFASALECLRIANRMMGREVYTWTLLAEGGR 62

Query: 62  QVWASDGLQITPDAAISNAPPIDTVIVCGGVGIQRSVTREHVTWLQAQARQSRRLGAVCT 121
            V  S G     D  +      DT+++C G+ +Q + T++ ++WL+ +AR+  ++G +CT
Sbjct: 63  TVSCSAGTSFQVDDDLVELQRDDTILLCSGISVQDATTKKLLSWLRREARKGLKIGGLCT 122

Query: 122 GSWALACAGLLDGFDCSVHWECLAAMQEAFPRVNMSTRLFTLDRNRFTSSGGTAPLDMML 181
            S++LA AGLLDG   ++HWE   +  E F  V ++  +F +D NR +++GGT+ +D+ML
Sbjct: 123 ASYSLARAGLLDGKRATIHWENADSFNEEFDEVELTKSVFVIDGNRMSTAGGTSSIDLML 182

Query: 182 HLISRDHGRELSAAISEMFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEP 241
            LI+ DHG +++ ++++  +Y  IR +QD QR+ +   +G   PKL  ++ +MEAN+EEP
Sbjct: 183 KLIASDHGEDIANSVADQLIYSSIRTDQDTQRLSIPTRIGVRHPKLSMVIQMMEANIEEP 242

Query: 242 IDLDELAVYVSVSRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCG 301
           I    LA  V +S RQLERLF++YL+ SP RYY++LRL +AR LL QT MS+I VA  CG
Sbjct: 243 ISPSILAQNVGMSTRQLERLFRRYLNRSPKRYYMELRLQKARNLLMQTDMSVINVALACG 302

Query: 302 FVSTPHFSKCYREYFGIPPRDERVGSNTA 330
           F S  HFSKCYR ++   P  ER GS +A
Sbjct: 303 FASPSHFSKCYRAHYDTTPYRER-GSKSA 330