Pairwise Alignments

Query, 368 a.a., AraC-family transcriptional regulator from Pseudomonas putida KT2440

Subject, 333 a.a., transcriptional regulator, AraC family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  129 bits (324), Expect = 1e-34
 Identities = 103/324 (31%), Positives = 155/324 (47%), Gaps = 20/324 (6%)

Query: 16  PQS---IGFLLLDNFTLISLASAVEPLRMANQLSGRE----LYRWHTLTIDGGQVWASDG 68
           PQS   I F L   F  + LA  ++    A +L+GR+     YR H +    G V +S G
Sbjct: 2   PQSARHIVFALYPGFVGLDLAGPLDVFSCAARLAGRQGRPAPYRCHFVARALGPVVSSSG 61

Query: 69  LQI----TPDA-----AISNAPPIDTVIVCGGVGIQRSVTREHVTWLQAQ-ARQSRRLGA 118
           + +    TPDA     A  +AP   T++V GGV   R      +  + A  A ++RR+ +
Sbjct: 62  MSVLAETTPDAFDATVAGPDAPAPHTLVVPGGVTPGREGDDPELRAMVAGLAARARRVVS 121

Query: 119 VCTGSWALACAGLLDGFDCSVHWECLAAMQEAFPRVNMST-RLFTLDRNRFTSSGGTAPL 177
           VCTG+  LA  GLLDG   + HW+  A +  A+P V +    +F  D    TS+G TA +
Sbjct: 122 VCTGALLLAACGLLDGRRATTHWQACARLAAAYPAVRVEPDAIFVRDGGVVTSAGVTAGI 181

Query: 178 DMMLHLISRDHGRELSAAISEMFV-YERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEA 236
           D+ LHL+  D G   +  ++ + V Y R    Q     PL+        +   +   MEA
Sbjct: 182 DLALHLVEEDLGPATAMEVARLLVVYRRRVGNQSQFSAPLRAQARAGA-RFGPLHVWMEA 240

Query: 237 NLEEPIDLDELAVYVSVSRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEV 296
            L E + ++ LA    +S R   R+F +    SP+RY  +LRL RAR+LL+     +  V
Sbjct: 241 RLGEDLGVERLAGQAHMSPRHFARVFPQETGMSPARYVEQLRLDRARELLESGESHMQTV 300

Query: 297 ASVCGFVSTPHFSKCYREYFGIPP 320
           A   GF S     + ++   G+ P
Sbjct: 301 AVAAGFGSEERLRRAFQRRMGVTP 324