Pairwise Alignments

Query, 315 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein from Pseudomonas putida KT2440

Subject, 312 a.a., glycine-betaine-binding protein from Sinorhizobium meliloti 1021

 Score =  319 bits (817), Expect = 6e-92
 Identities = 157/306 (51%), Positives = 212/306 (69%), Gaps = 3/306 (0%)

Query: 8   LLVALLSAPLLAQAAEPEQCQTVRFSDVGWTDITVTTATTSVVLEALGYKTHTTMISVPV 67
           +   LL    +A AAEPE C+TVRFSDVGWTDIT TTA  S +LEALGY   + ++S+PV
Sbjct: 8   MTAGLLMTIGVAAAAEPESCKTVRFSDVGWTDITSTTAVASTILEALGYAPQSKLLSIPV 67

Query: 68  TYKSLATGKDLDVFLGNWMPTMENDIKQYRDAGTVETVRANLENAKYTLAVPQALYDKGL 127
           TY S+   KD+DV+LG+W P+ME D K + +  ++E +  NL  AKYT AVP+ + D G+
Sbjct: 68  TYASMKN-KDIDVYLGDWQPSMEADRKPFLEDKSIEVIGPNLTGAKYTFAVPKYVADAGV 126

Query: 128 KDFSDIPKFKKELDGKIYGIEPGNDGNRTIQSMIDKNAFGLKDAGFKIVQSSEAGMLSQV 187
           KD SD+ KF  +   KIYGIEPGN+GNR I  MI+K  FGL   G+++V+SSE GML++V
Sbjct: 127 KDISDLQKFPDKFGRKIYGIEPGNNGNRMILDMINKGDFGL--TGWELVESSEQGMLAEV 184

Query: 188 DRAQKRGEALVFLGWEPHPMNTRFKMQYLTGGDDFFGPDFGKATVLTNTRKGYTQECSNV 247
           +RA K  + +VFLGW PHPMNTR+++ YL+G D +FGP++G A + TN R GY QEC NV
Sbjct: 185 ERATKDDQWIVFLGWAPHPMNTRYQIDYLSGADAYFGPNYGGADIYTNIRAGYAQECPNV 244

Query: 248 GQLLKNLSFELKDESTMMGYVLDDKMKPEAAAKKWIKDNPGKLDAWLAGVTTVDGKPGLE 307
            + + NL F L+ E+ +M  +L+D   P+ AA  W+K +P  +  WL GVTT DG P  E
Sbjct: 245 ARFVTNLRFTLEMENEIMNGILNDGNDPKDAAADWLKAHPEAVAPWLEGVTTFDGAPAKE 304

Query: 308 AVKAKL 313
           AV++ L
Sbjct: 305 AVESAL 310