Pairwise Alignments

Query, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

Subject, 295 a.a., permease from Sinorhizobium meliloti 1021

 Score =  195 bits (495), Expect = 1e-54
 Identities = 106/247 (42%), Positives = 156/247 (63%), Gaps = 5/247 (2%)

Query: 27  YFDAIAQGLE----FMIHGVTSALTFFNPFVLIALFAALAHFIQRKWALTAFVALSFLLI 82
           Y DAI    +    F+IH          P +LI L A +A F  R W + A    + LLI
Sbjct: 33  YGDAIESFFDPLQFFLIHAERFMTRTPWPIILI-LIAVIAWFASRNWKIVAGAIGTLLLI 91

Query: 83  LNLGYWQETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMRPVLDLMQTVPTFVYL 142
             L  W +TM+T++ +   TV+ + IG+P+GI+ +    F   + PVLD+MQT+P+FVYL
Sbjct: 92  GYLDMWDDTMKTISMIFVCTVLSIAIGIPMGIIMSRSDRFQNIVNPVLDVMQTMPSFVYL 151

Query: 143 IPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGICDVPQELMDAGKAFGCSRRQLLTRIE 202
           IP + L G+G VPGLI+ V++AI   IRLT LGI  V +++++A  AFG S  Q L  ++
Sbjct: 152 IPVVMLLGIGKVPGLIAVVIYAIPPMIRLTNLGIRLVDKDVLEAADAFGSSNWQKLKNVQ 211

Query: 203 LPHAMPSIAAGVTQCIMLSLSMVVIAALVGADGLGKPVVNALNTADISLGFEAGLAIVLL 262
           +P A+P+I AG+ Q IM++L+MVVIA+++G  GLG+PV+ A+     +LG   GLAIV +
Sbjct: 212 MPLALPTIMAGINQTIMMALAMVVIASMIGVQGLGQPVLKAIANQYFTLGIFNGLAIVGI 271

Query: 263 AIMLDRI 269
           AI+ DR+
Sbjct: 272 AIIFDRV 278