Pairwise Alignments

Query, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

Subject, 342 a.a., glycine betaine transport system permease protein from Phaeobacter inhibens DSM 17395

 Score =  179 bits (455), Expect = 6e-50
 Identities = 99/245 (40%), Positives = 155/245 (63%), Gaps = 3/245 (1%)

Query: 29  DAIAQGLEFMIHGVTSALTFFNPFVLIALFAALAHFIQRKWALTAFVALSFLLILNLGYW 88
           D I Q L +M+ G          F+++ L  A++ +  R   +T FVA+S +L+  + ++
Sbjct: 86  DPITQPLSWMLDGALWLFEAMPWFIMVPLLVAISWYASRSRPVTIFVAVSIMLLALVDHY 145

Query: 89  QETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTL 148
              M+TL+ +   T + V+ GVP+GI  +       ++ P+LDL+QT+PTFVYLIP + L
Sbjct: 146 DVAMQTLSIIFVCTTISVLFGVPIGIAMSKSDRLQKSVVPLLDLLQTLPTFVYLIPLIFL 205

Query: 149 FGL--GVVPGLISTVVFAIAAPIRLTYLGICDVPQELMDAGKAFGCSRRQLLTRIELPHA 206
           F +    + G I+ +++AI   IRLT LGI  V Q++++A  AFG + RQ L R++LP A
Sbjct: 206 FSVTESKLYG-IAIILYAIVPVIRLTDLGIRLVDQDVIEAANAFGMNDRQKLMRVQLPLA 264

Query: 207 MPSIAAGVTQCIMLSLSMVVIAALVGADGLGKPVVNALNTADISLGFEAGLAIVLLAIML 266
           +P+I AG+ Q IM+SL+MVVIA+LV A GLG  V+  +   ++ +G  AG+ IVLLA++L
Sbjct: 265 LPNIMAGINQTIMMSLAMVVIASLVSAPGLGVNVLRGIRNLELGVGIVAGIGIVLLAVIL 324

Query: 267 DRICK 271
           DR+ K
Sbjct: 325 DRVSK 329