Pairwise Alignments

Query, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

Subject, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

 Score =  198 bits (503), Expect = 1e-55
 Identities = 101/264 (38%), Positives = 170/264 (64%), Gaps = 3/264 (1%)

Query: 9   LGQYIASFVEWLTQNGANYFDAIAQGLEFMIHGVTSALTFFNPFVLIALFAALA-HFIQR 67
           +G+++ + +++L  N + +FD I+  ++  +      L   NP+++I L A +    +  
Sbjct: 9   IGKFLVNLIDFLIDNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIVWKTVNL 68

Query: 68  KWALTAFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMR 127
           K  L +   L  ++I+ +G W  +M TL+ +  +T++ +++G+PLGI+ A   +  T + 
Sbjct: 69  KSMLYSVFFL--VIIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLLD 126

Query: 128 PVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGICDVPQELMDAG 187
           P+LD+MQT+P+  YLIP +  FG+G VPG+I+TV+FA+   I+LT LGI  V  EL++ G
Sbjct: 127 PMLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVG 186

Query: 188 KAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVGADGLGKPVVNALNTA 247
           +AFG +  Q+LT+IELP A+PSI  GV Q IMLS SMVVIA  +G+ GLG+ +++ +   
Sbjct: 187 RAFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRY 246

Query: 248 DISLGFEAGLAIVLLAIMLDRICK 271
            ++   EAG+A+  LA++ DRI +
Sbjct: 247 SLAPALEAGIAVTFLAVIFDRITR 270