Pairwise Alignments

Query, 256 a.a., Imidazole glycerol phosphate synthase subunit HisF from Pseudomonas putida KT2440

Subject, 257 a.a., hisF protein (cyclase) (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  199 bits (506), Expect = 5e-56
 Identities = 104/256 (40%), Positives = 149/256 (58%), Gaps = 3/256 (1%)

Query: 3   LAKRIIPCLDVDNGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDT 62
           LAKRI+PCLDV +G VVKGV+F N    GD V +A RY  +GADE+ F DITAS   R  
Sbjct: 2   LAKRIVPCLDVKDGCVVKGVQFRNHEIVGDIVPLAARYAAEGADELVFYDITASAHDRVV 61

Query: 63  TLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAADRFG 122
               V R+A Q+ IP  V GG++T+   R LL  GADK+S+N+ A+ +P  +    D FG
Sbjct: 62  DKSWVSRVAEQIDIPFCVAGGIKTITQARELLAFGADKISVNSPALSDPSLISRLQDEFG 121

Query: 123 SQCIVVAIDAKKVSGPGEAPRWEIFT--HGGRKPTGLDAVEWAKKMEGLGAGEILLTSMD 180
            QCIV+ ID+       ++ + + FT      K T     +W ++++  G GEI+L  M+
Sbjct: 122 RQCIVIGIDS-FYDAASDSYKVKQFTGDEAATKETAWYTQDWVEEVQKRGCGEIVLNVMN 180

Query: 181 QDGMKNGFDLGVTRAISDALGIPVIASGGVGNLQHLADGILEGHASAVLAASIFHFGEYT 240
           QDG++ G+D+     +     +P+IASGG G + H  D  ++    A LAAS+FH     
Sbjct: 181 QDGVRGGYDIKQLSLVRQLCDVPLIASGGAGTMAHFRDVFIDAKVDAALAASVFHKAIIN 240

Query: 241 VPEAKAYMASRGIVVR 256
           + E K Y+A+ GI +R
Sbjct: 241 IGELKQYLAAEGIAIR 256