Pairwise Alignments

Query, 257 a.a., Arginine/ornithine transport ATP-binding protein AotP from Pseudomonas putida KT2440

Subject, 241 a.a., amino acid ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  252 bits (643), Expect = 6e-72
 Identities = 127/247 (51%), Positives = 176/247 (71%), Gaps = 11/247 (4%)

Query: 8   LEIRNLHKRYGEQEILKGISLTARDGDVISILGSSGSGKSTLLRCINLLENPHQGEILVA 67
           + I NLHK YG+  +LKGI+   R G+V+S++G SGSGKST LRCINLLENP QG+I + 
Sbjct: 2   INITNLHKSYGDNAVLKGINEHIRQGEVVSVIGPSGSGKSTFLRCINLLENPTQGDIEIE 61

Query: 68  GEALKLKAAKNGDLIAADNRQINRVRSEIGFVFQNFNLWPHMSILDNIIEAPRRVLGQSK 127
           G+++  K A            ++++R ++G VFQNFNL+PH ++L NI  AP  +   ++
Sbjct: 62  GQSITAKDAC-----------VDKLRQKVGMVFQNFNLFPHKTVLQNITLAPVSLKLMTQ 110

Query: 128 AEAIEAAEALLNKVGIYDKRHSYPAQLSGGQQQRAAIARTLAMKPKVILFDEPTSALDPE 187
           AEA   A ALL +VG+ DK ++YP+ LSGGQ+QR AIAR LAM+P ++LFDEPTSALDPE
Sbjct: 111 AEADNKALALLTQVGLQDKANAYPSSLSGGQKQRVAIARALAMEPDLMLFDEPTSALDPE 170

Query: 188 MVQEVLNVIRALAEEGRTMLLVTHEMSFARHVSSEVVFLHQGLVEEQGSPQQVFENPTSA 247
           MV +VL+V++ LA++G TM++VTHEM FAR VS  V+F+  G V E   P+++F  P  A
Sbjct: 171 MVGDVLDVMKDLAQKGMTMVIVTHEMGFARDVSDRVIFMDGGYVVESNIPEELFTRPKEA 230

Query: 248 RCKQFMS 254
           R + F+S
Sbjct: 231 RTQSFLS 237