Pairwise Alignments

Query, 250 a.a., L-arginine ABC transporter - periplasmic binding subunit from Pseudomonas putida KT2440

Subject, 260 a.a., L-lysine ABC transporter, substrate-binding component (from data) from Sinorhizobium meliloti 1021

 Score =  233 bits (593), Expect = 4e-66
 Identities = 120/246 (48%), Positives = 164/246 (66%), Gaps = 6/246 (2%)

Query: 10  AAAATLVMSANAMA-AEKLRMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVECSV 68
           +AA  ++M+  AMA  EK+ +G E AYPPFNN ++ G + GFD DI  ALC +MK EC+ 
Sbjct: 12  SAAVFVLMAGVAMAEGEKVVIGTEGAYPPFNNLESDGTLTGFDIDIAKALCEEMKAECTF 71

Query: 69  VTSDWDGIIPALNAKKFDFLVSSLSITDERKQAVDFTNPYYSNKLQFIAPKNVDF-KTDK 127
           VT DWDGIIPAL AKKFD +V+S+SIT+ERKQ VDFTN YY+     + PK+    +   
Sbjct: 72  VTQDWDGIIPALIAKKFDAIVASMSITEERKQQVDFTNKYYNTPPAIVVPKDSPITEATA 131

Query: 128 ESLKGKVIGTQRATLAGTYLEDNYPDVEIKLYDTQENAYLDLVSGRIDGILADKYVQYEW 187
            +L GK +G Q +T    Y E +  + E+KLY T +   LDL +GRID  + D  V  EW
Sbjct: 132 AALSGKALGAQGSTTHSNYAEAHMKESEVKLYPTADEYKLDLANGRIDAAIDDVVVLSEW 191

Query: 188 LKSKDGSNFEFKG----EPVMDSDKIGIAVRKGDTKLRDDLNKALAEIKADGTYKKINDK 243
           LK++DG+  +  G    +PV++ +  GIA+RKGD  LR+ LNKA+  I+A+G YK+IN+K
Sbjct: 192 LKTEDGACCKLLGTLPIDPVINGEGAGIAIRKGDDALREKLNKAIEAIRANGKYKQINEK 251

Query: 244 YFPFSI 249
           YFPF +
Sbjct: 252 YFPFDV 257