Pairwise Alignments

Query, 230 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 232 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  206 bits (523), Expect = 4e-58
 Identities = 111/230 (48%), Positives = 154/230 (66%), Gaps = 4/230 (1%)

Query: 3   IDLHGFGPAMMAGTLMTVKLALCALLLGLVLGLLGALAKTSPFKPLQWLGGFYSTLVRGV 62
           +D  G+G  ++ G  MT+KL L A+  GLVLGL+G   K S     + +G  Y+ L RG+
Sbjct: 1   MDFQGYGDLLITGAAMTIKLVLGAVSFGLVLGLIGTTLKLSRNALARAVGNAYTDLFRGL 60

Query: 63  PELLWVLLIYFGTVGLMNSLGE---ALNMPGLELSAFAAGVIALGLCFGAYATEVFRGAI 119
           PELL VL++Y+G   L+  L     AL++  + +S +  GV++LGL FGAYA+EVFRGAI
Sbjct: 61  PELLVVLIMYYGAEALVRWLVNDVLALDV-AVSISPYVGGVLSLGLIFGAYASEVFRGAI 119

Query: 120 LAIPKGHREAGLALGLSKGRILSRIILPQMWRIALPGLGNLFMILMKDTALVSVIGLEEI 179
           LAIP+GH EA  A G+       RIILPQ+WR+ALPGLGNLF++ +KDTALVS IGL E+
Sbjct: 120 LAIPRGHVEAARAFGMGPVLTYRRIILPQVWRVALPGLGNLFLVSLKDTALVSAIGLNEL 179

Query: 180 MRHSQIGVTVTKEPFTFYMVAACIYLGLTVLAMTGMHFMEKRAARGFARA 229
           MR + I    T++ FTF + AA +YL +T+++M  +  +E+RA RG   A
Sbjct: 180 MRSANIAGRSTRDYFTFLLAAAFLYLAMTMVSMAVIALLERRANRGHVGA 229