Pairwise Alignments

Query, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 246 a.a., Transcriptional regulatory protein ompR from Pseudomonas fluorescens FW300-N2E2

 Score =  186 bits (473), Expect = 3e-52
 Identities = 112/231 (48%), Positives = 146/231 (63%), Gaps = 3/231 (1%)

Query: 5   LLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGEDGLSL 64
           +L+VDDD EIREL+ +YL   G      ADG+QMR  L    V+L+VLD+M+PG+DGL L
Sbjct: 7   VLIVDDDREIRELVGNYLKKNGLRTTVVADGRQMRAFLETTPVDLIVLDIMMPGDDGLVL 66

Query: 65  CRQLQATPGLA--VIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVLRRPQR 122
           CR+L+A    A  V+ML+A+    DRIIGLE+GADDYL KPF  REL+ARI AVLRR + 
Sbjct: 67  CRELRAGKHKATPVLMLTARNDETDRIIGLEMGADDYLVKPFAARELLARINAVLRRTRM 126

Query: 123 LGTSAEEPMVDAQL-FAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANNRVVSRD 181
           L  +         L F  +RL+   R L   DG  + L  ++YR+LR  L+   RV++RD
Sbjct: 127 LPPNLVVTESGRLLAFGRWRLDTTARHLLDTDGTMVALSGAEYRLLRVFLDHPQRVLNRD 186

Query: 182 QLTRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYLLSL 232
           QL     GRD    DRS+D+ VSRLRQ+L       A I T+R+EGY+ SL
Sbjct: 187 QLLNLTQGRDADLFDRSIDLLVSRLRQRLLDDAREPAYIKTVRSEGYVFSL 237