Pairwise Alignments

Query, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 243 a.a., DNA-binding response regulator GltR, controls specific porins for the entry of glucose from Pseudomonas fluorescens FW300-N1B4

 Score =  183 bits (465), Expect = 2e-51
 Identities = 110/241 (45%), Positives = 144/241 (59%), Gaps = 7/241 (2%)

Query: 1   MSTTLLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGED 60
           ++ ++L+VDDD EIRELL  YLT AG+ V    DG   R  L     +LV+LD+MLP ED
Sbjct: 4   VNKSILLVDDDQEIRELLDTYLTRAGFQVRTTPDGAGFRQALNEAPSDLVILDVMLPDED 63

Query: 61  GLSLCRQLQATPGLA---VIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVL 117
           G SLCR ++  P  A   +IML+A     DR+IGLE+GADDYL KPF PREL ARIKA+L
Sbjct: 64  GFSLCRWIRQHPRQAHVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALL 123

Query: 118 RRPQRLGTSAEEPMVDAQLFAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANNRV 177
           RR Q      E    +   F  +RL+ V   L   DGE + L  +D+ +L+  L+    +
Sbjct: 124 RRAQ---FGQERSGSEVLAFDDWRLDMVSHRLFHIDGEEVILSGADFALLKLFLDHPQEI 180

Query: 178 VSRDQLTRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYLLSLAPLAA 237
           + RD +  +  GRD +P DR VDM VSRLRQ+LR        I T+R  GY L+ A + A
Sbjct: 181 LDRDTIGNATRGRDLMPLDRIVDMAVSRLRQRLRDTEKPPRLIRTVRGSGYQLA-ANVVA 239

Query: 238 G 238
           G
Sbjct: 240 G 240