Pairwise Alignments

Query, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 259 a.a., two component transcriptional regulator, winged helix family from Pseudomonas syringae pv. syringae B728a

 Score =  206 bits (524), Expect = 4e-58
 Identities = 116/234 (49%), Positives = 148/234 (63%), Gaps = 4/234 (1%)

Query: 2   STTLLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGEDG 61
           S   L+VDDD  IRELLCDYLT    N     DG QMR  L     ++VVLDLMLPGEDG
Sbjct: 29  SVRALIVDDDVAIRELLCDYLTRFNINARGVTDGTQMRQALTDETFDVVVLDLMLPGEDG 88

Query: 62  LSLCRQLQATPGLAVIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVLRRPQ 121
           LSLCR L++T  + ++ML+A+    DRIIGLE+GADDY+AKPFEPREL+ARI+ +LRR +
Sbjct: 89  LSLCRWLRSTSDIPILMLTARCEPTDRIIGLELGADDYMAKPFEPRELVARIQTILRRVR 148

Query: 122 RLGTSAEEPMVDAQLFAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANNRVVSRD 181
              +     +     F  +RL  V R LT  DG  + L  +++R+LR  LE  +RV+SR+
Sbjct: 149 DERSDQRTTI----RFDAWRLNSVLRQLTAADGLVVPLSNAEFRLLRVFLERPHRVLSRE 204

Query: 182 QLTRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYLLSLAPL 235
           QL  +A GR     DRS+D+ VSRLRQ+L   P     I T+R EGYL     L
Sbjct: 205 QLLDAARGRSIEAFDRSIDLLVSRLRQKLGDDPKNPQLIKTVRGEGYLFDAREL 258