Pairwise Alignments

Query, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 244 a.a., response regulator with CheY-like receiver domain and winged-helix DNA-binding domain from Dechlorosoma suillum PS

 Score =  174 bits (442), Expect = 1e-48
 Identities = 104/228 (45%), Positives = 144/228 (63%), Gaps = 4/228 (1%)

Query: 5   LLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGEDGLSL 64
           +LVVDDD  +R+LL  YL + G+ V  A +   M   LAR   +L+VLDLMLPGEDGLS+
Sbjct: 8   ILVVDDDQRLRDLLLRYLGEQGFVVKTAENAPAMDKLLARETFDLLVLDLMLPGEDGLSI 67

Query: 65  CRQLQAT-PGLAVIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVLRRPQRL 123
           CR+L+A  P  AV+ML+AKG  +DRI+GLE+GADDYL KPF PREL+ARI AVLRR + L
Sbjct: 68  CRRLRAADPHQAVLMLTAKGDEIDRIVGLEMGADDYLPKPFNPRELVARIHAVLRR-RAL 126

Query: 124 GTSAEEPMVDAQLFAG-FRLEHVKRLLTR-PDGETLTLPRSDYRVLRELLEANNRVVSRD 181
                    +  +  G   ++   R LTR  +GE + L   ++ VL+ LL+   + +SRD
Sbjct: 127 PPPGSPVEAEGTVQVGEISIDLATRRLTRGAEGEAVMLTTGEFAVLKVLLQHPRQPLSRD 186

Query: 182 QLTRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYL 229
           +L   A GR+  P DR++D+ +SRLR+ +   P     I T+   GY+
Sbjct: 187 RLMSLARGREQGPFDRAIDVQISRLRKLIEPDPQTPRYIQTVWGFGYV 234