Pairwise Alignments

Query, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 246 a.a., two component transcriptional regulator, winged helix family from Marinobacter adhaerens HP15

 Score =  179 bits (455), Expect = 3e-50
 Identities = 103/228 (45%), Positives = 143/228 (62%), Gaps = 4/228 (1%)

Query: 4   TLLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGEDGLS 63
           ++LVVDDD  IRELL ++LT  GY+V  A DG QMR++L    V+L+VLD+MLPG+DG +
Sbjct: 15  SVLVVDDDAAIRELLEEHLTRVGYDVRTAGDGDQMRERLNSSHVDLIVLDVMLPGDDGFT 74

Query: 64  LCRQLQATPGLAVIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVLRRPQRL 123
           LCRQ++    + +IML+A     DR++GLE+GADDYLAKPF  REL AR+KA+LRR    
Sbjct: 75  LCRQIREYSRVPIIMLTASSDETDRVVGLELGADDYLAKPFSARELQARVKALLRRAS-F 133

Query: 124 GTSAEEPMVDAQLFAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANNRVVSRDQL 183
             S     VD   F  +RL+ +   L   + +   L  +D+ +L+  L   N V+ RD +
Sbjct: 134 SRSDNPRYVD---FDRWRLDTLAHELIDENQQGTALSGADFALLQLFLSHPNEVLDRDTI 190

Query: 184 TRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYLLS 231
           +    GR+ +P DR VD+ VSRLRQ+L         I T+R  GYLL+
Sbjct: 191 SDVTRGRESMPLDRVVDVAVSRLRQRLGDQGRNPRLIKTVRGAGYLLA 238