Pairwise Alignments

Query, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 246 a.a., response regulator transcription factor from Dyella japonica UNC79MFTsu3.2

 Score =  180 bits (456), Expect = 3e-50
 Identities = 107/237 (45%), Positives = 144/237 (60%), Gaps = 3/237 (1%)

Query: 5   LLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGEDGLSL 64
           +LVVDDD EIR  + +YL   G    AA DG+ M  QL     +LVVLD+M+PG+DGL L
Sbjct: 7   ILVVDDDREIRNGVVEYLRKNGLRASAAVDGRDMFAQLDGSAFDLVVLDIMMPGDDGLVL 66

Query: 65  CRQLQATP--GLAVIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVLRRPQR 122
           CR L+      L V++L+A+    DRIIGLE+GADDY+ KPF PREL+ARIKAV+RR + 
Sbjct: 67  CRTLRGGKHRALPVVLLTARDDETDRIIGLEMGADDYVTKPFAPRELLARIKAVIRRTRM 126

Query: 123 LGTSAEEPMVDAQL-FAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANNRVVSRD 181
           L  +       ++L F  +RL+   R L    G  + L  +++R+LR  L+   RV+SRD
Sbjct: 127 LPPNLRVTEAASELAFGRWRLDTTARHLLDESGTIVPLSGAEFRLLRVFLDHPQRVLSRD 186

Query: 182 QLTRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYLLSLAPLAAG 238
           QL     GRD    DRS+D+ VSRLR +L       A I T+R+EGY+ S+     G
Sbjct: 187 QLLNLTQGRDAELFDRSIDLLVSRLRTRLSDNAKDQAYIKTVRSEGYVFSMPVTVPG 243