Pairwise Alignments

Query, 439 a.a., outer-membrane porin D from Pseudomonas putida KT2440

Subject, 424 a.a., outer membrane porin from Pseudomonas syringae pv. syringae B728a

 Score =  563 bits (1450), Expect = e-165
 Identities = 281/439 (64%), Positives = 338/439 (76%), Gaps = 15/439 (3%)

Query: 1   MLKTRISLVALAMIAATQAQANDQADSKGFIEDSHANVLLRNAYINRDKKHGTDDQIEWG 60
           ML TR+ ++AL +I+A+QA A  QADSKGF+EDS  NV LRNAYINRD K+  +D+ EWG
Sbjct: 1   MLNTRMGMLALGIISASQAMAQGQADSKGFVEDSSLNVNLRNAYINRDFKNDREDKSEWG 60

Query: 61  QAFIANFSSGFTQGTVGVGVDAFGLYAVRLDGGKGHNGGGGVDFFKPHETTNAEGNASSP 120
           QAF+  F+SGFTQGTVGVGVDAF LY +RLDGGKG +G GG+DFFK  ++       ++ 
Sbjct: 61  QAFMGTFASGFTQGTVGVGVDAFALYGIRLDGGKGRSGNGGIDFFKQGDS------GAAA 114

Query: 121 HNLARGGAAVKFRISNTVLKYGDQMPALPVLQYDDARLLPESFTGTLITSKEIQGLELNA 180
            +L+R GAAVK R SNTV+KYGDQMP LPVL YD++RLLPES+TGTLITSKEI+GLE+ A
Sbjct: 115 DDLSRAGAAVKARFSNTVIKYGDQMPQLPVLNYDNSRLLPESYTGTLITSKEIEGLEVVA 174

Query: 181 GRFTQEARKSAERRDGGGLKSINVLGGSYKFTDNFTASLYTADNEDVMKKHYLGLNYVFP 240
           GRFTQEARKSAE RD G LKSINV G SYKFTD F+A+ Y +DNEDV KK YL LNYVF 
Sbjct: 175 GRFTQEARKSAEGRDSGDLKSINVYGASYKFTDEFSAAFYASDNEDVFKKQYLNLNYVFA 234

Query: 241 IASDQSLTLDFNGYKSDINNKYVKAAGLNGDSNTIWSLAATYAYGAHSFTLAHQRSTGST 300
           +  DQSLT DFNGYK+ ++  +  +   +   N IWSLAAT+A G HSFTLAHQRSTG  
Sbjct: 235 LPQDQSLTFDFNGYKTRLDKDFTAS---DARDNKIWSLAATWAVGIHSFTLAHQRSTGDM 291

Query: 301 GYNYGFYQNAGGVGDGGSTIYLANSYWSDFNAEDERSWQLGYGLDFGAYGIPGLTYKLAY 360
           GY YG Y+N GG GDGG+TIYLANSYWSDFN +DERSWQ  YG+D     +PGL+YK AY
Sbjct: 292 GYAYGGYRNDGGFGDGGNTIYLANSYWSDFNGKDERSWQAAYGVDLSGLVLPGLSYKAAY 351

Query: 361 VVGDNINTRNVANPQGFGEGKEREIFNQIRYVVQDGPAKDLSIKLRSSFLRTNNAVQQNG 420
           V GDNI+        G G+G EREIF+Q+ YVVQ GPAKDLS++LR+SFLR ++  Q   
Sbjct: 352 VRGDNIDD----GTAGSGDGTEREIFSQLTYVVQSGPAKDLSLRLRNSFLRVSDDAQ--A 405

Query: 421 YNDDGNEVRVFVEYPISIF 439
           YN +GNE R+FV+YPI+IF
Sbjct: 406 YNSEGNETRIFVDYPINIF 424