Pairwise Alignments

Query, 265 a.a., aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate from Pseudomonas putida KT2440

Subject, 292 a.a., ABC-type nitrate/sulfonate/bicarbonate transport system, permease component from Pseudomonas stutzeri RCH2

 Score =  141 bits (355), Expect = 2e-38
 Identities = 81/239 (33%), Positives = 122/239 (51%), Gaps = 12/239 (5%)

Query: 21  LLLAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTH------LAISGWRAGLGF 74
           L   +W L  + G      +P+P AV      L R G  WT       + IS WR   GF
Sbjct: 57  LPFVVWWLWTALGLADPMFMPSPGAV------LERIGRWWTSEGLLGDIGISVWRVMAGF 110

Query: 75  VIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVAL 134
                I L LG   G     +  L+     IR +P +A IPLV+LW GIDE +K+ ++ +
Sbjct: 111 GASALIALPLGLYIGTYRPVQAFLEPLTDFIRYMPAVAFIPLVMLWVGIDEGSKVLIIFI 170

Query: 135 GTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGFMW 194
           GT F + L     +R V  A +E A++ G +   + + VILP A P++L  +R   G+ W
Sbjct: 171 GTFFQMVLMVAEDVRRVPMAQIEAAQTMGANRGEIVKLVILPSAKPALLDTLRITCGWAW 230

Query: 195 LTLIVAETISANAGIGYLAMNAREFLQTDVVVLAIVLYAVLGKIADLAARGLERVWLRW 253
             L+VAE ++AN+G+GY  + A+ ++ TD +   I+L  ++G + D A R L R    W
Sbjct: 231 TYLVVAELVAANSGLGYAILKAQRYMHTDKIFAGILLIGLIGLLTDQAFRWLHRRAFPW 289