Pairwise Alignments

Query, 444 a.a., outer-membrane porin E from Pseudomonas putida KT2440

Subject, 439 a.a., outer membrane porin, OprD family. from Pseudomonas stutzeri RCH2

 Score =  203 bits (517), Expect = 8e-57
 Identities = 142/469 (30%), Positives = 217/469 (46%), Gaps = 65/469 (13%)

Query: 4   SSLALAVALG---VLAQQAGAAGFVEDSKLSLSSRTMYFNDDNRESGIDQKESGQGFKLD 60
           S  AL++ALG   V AQ   A GF+E S LSL +R  YFN D R+    +  +G G+  +
Sbjct: 8   SLTALSLALGSAPVFAQSETAEGFIEGSTLSLINRNFYFNRDFRDG---ESAAGNGYSEE 64

Query: 61  YL--------SGFTQGTVGFGVDVQALWGIHLDGGRG-SRPDANNTFFPSDSDGSAVHDW 111
           +         SG+TQG+VG G D  A+ G+ LD G G S    +    P DS G    D+
Sbjct: 65  WAHGLMAFFESGYTQGSVGIGFDAFAMLGLKLDSGSGRSGVGGSIDLLPHDSAGDPEDDF 124

Query: 112 ARIGGNAKARFSKTEVHYGSALAPMLPILVSNDGRLLPQTFEGGTLQSKEIDNLTINAGQ 171
            R+GG  KAR   TE+  G    P  P++   D RLLP++F+G T+ +  +D+LT+  G+
Sbjct: 125 TRVGGAVKARLLDTEIKAGDVF-PTTPVVHFGDSRLLPESFKGVTVVNNSLDDLTLQGGR 183

Query: 172 LTHAMGRASS---NRTGLSVSGAFRDSNKFQFAGGDYKLTPDLTLQYYYSNLEDFYKQHF 228
           L HAM + ++   N   ++  G   D+    +AGGDY +  +++L  Y S L+D + QH+
Sbjct: 184 L-HAMSQPNTSNMNEDFVTFYGGGVDAPWLGYAGGDYSVNENISLSLYTSRLKDAWNQHY 242

Query: 229 LGATHVFKIADNQSFKTDLRYFDSSSDGKNGQTGYAFDNNGGYAKNSGEVDNKTWSAMFT 288
            GA+  + ++D  +      Y+ ++ +G+               +  GE +N  WS+   
Sbjct: 243 FGASATYPLSDIVALLASFNYYKATDEGR---------------ELLGEFNNNIWSSSLG 287

Query: 289 YTLGGHALMLGHQQVGDDGGFVWLNQGSVRKDGSTSSLEGNGGASFYLFTDSMINQFARA 348
              G H +   +Q+   +  F +L Q                  S YL      + F   
Sbjct: 288 VAFGAHTVTASYQRNNGNNDFDYLRQAD----------------SIYLNNSIQYSDFNSP 331

Query: 349 GENTTFGQYSYDFAALGVPGLKASVSYLRG--------DDVRNRSGDG-----TYNEWER 395
            E +   +Y  + A  G+PGL     Y RG        ++V  R  D        N WER
Sbjct: 332 KEQSWMLRYDLNMAEYGIPGLTFMTRYARGWGADYSNANEVYMRQDDNGAPLTGQNRWER 391

Query: 396 DARVDYTLQEGTLKGLGFSLRQGVYRGSGESALDKDQTRFIVNYTYNFL 444
           D    Y +Q G+LK L   +RQ   R +   + D D+ RFI  Y  + L
Sbjct: 392 DVEARYVVQTGSLKDLSLRVRQATTRATAFES-DLDEVRFIAEYPLSIL 439