Pairwise Alignments

Query, 264 a.a., periplasmic cystine-binding protein from Pseudomonas putida KT2440

Subject, 251 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

 Score =  142 bits (358), Expect = 7e-39
 Identities = 83/262 (31%), Positives = 147/262 (56%), Gaps = 20/262 (7%)

Query: 1   MSKFAKPLLNASLALLLGAGLLSQAFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKL 60
           M  + K LL A+ +L++G    +QAFA E+L+         +G EG YPPF+  D +GK+
Sbjct: 1   MKSYKKILLTAAASLIIG----TQAFAAEKLR---------IGTEGAYPPFNLIDASGKV 47

Query: 61  TGFEVELSELLAKELGVKAKIQPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEP 120
            GF++++S  L  ++ V+ ++  + WDGI+ AL + + D +   ++++EERK   DF++ 
Sbjct: 48  VGFDLDISHALCAKMKVECEVVTSDWDGIIPALNAGKFDFLAASMSVTEERKNAVDFTDH 107

Query: 121 YTVSGIQALILKKKAEQLNIKGAQDLAGKKVGVGLGTNYEQWVKKDVPQ-ADVRTYEDDP 179
           Y  + +Q  +  K  E    +G   L GK +G    T    W++ ++ +  D++ Y+   
Sbjct: 108 YYTNKLQ-FVAPKNVEFQTDEGY--LKGKVIGAQRATIAGTWLEDNLDRVVDIKLYDTQE 164

Query: 180 SKFADLRNGRIDAILIDRLAALEY--AQKAKDTELAGD-AFSRLESGVALRKGEPELLAA 236
           + + DL +GR+D IL D     E+  +   K+ E  G+  F   +  +A+RKG  EL   
Sbjct: 165 NAYLDLASGRVDGILADTFVQWEWLKSDAGKNFEFKGEPVFDDDKIAIAVRKGNDELRER 224

Query: 237 INKAIDKLKADGTLAKLSEKYF 258
           +NKA+ ++ ADGT  ++++KYF
Sbjct: 225 LNKALAEIIADGTYKQINDKYF 246