Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 890 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  382 bits (980), Expect = e-110
 Identities = 210/537 (39%), Positives = 318/537 (59%), Gaps = 3/537 (0%)

Query: 92  DSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKFKSGHHGLAFYQEVFATLA 151
           + +    ++ DR G + +VN AF  I+ +   EV G R +  K+  +      +  + LA
Sbjct: 346 EQSASAFILVDRDGRVEYVNPAFTSISQFSAAEVRGHRLTDLKALENLSELLFDTSSVLA 405

Query: 152 EKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSHYVAVFSDISAIKHSEQELAYLAH 211
               W GE  +RRK+ E Y    +I  + +DEG L+HY+ ++ DI+  K + Q +  LA+
Sbjct: 406 HSNSWQGEFRSRRKNLEPYWGQLSISKVFNDEGVLTHYIGIYEDITRSKLAHQHIERLAY 465

Query: 212 HDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDLDHFQSINDGLGHTIGDQLLKLV 271
            D LT L NR  F   LE+  AA  A  R C LLL+D+D+F+ IND LGH  GD+LL  +
Sbjct: 466 TDNLTNLGNRPYFIRSLEERFAAG-AEPRLC-LLLVDIDNFKRINDSLGHQTGDKLLTSL 523

Query: 272 GERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCIIERMREPFQFDGNRLFIS 331
             RL   L     LAR   +EF +L ++  ++ +  +LA  ++  + +P   D   + +S
Sbjct: 524 ARRLRNGLSQQSVLARFASNEFALLFDD-MELDEGLRLADQVLRVLDKPLFVDKQLISVS 582

Query: 332 ASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTEELTAHAQHRVETAAELRR 391
           AS+G++  P      E L+++A  AL+KAK+NG+    ++TE L A A +++     LRR
Sbjct: 583 ASLGLACSPQHGRDPETLMKHAGQALHKAKANGKNQVQIFTEALHAEANYKLFVENNLRR 642

Query: 392 ALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPRRGLVPPGEFIPIAERTGLIAEIDTW 451
           AL Q+EL V++QP   L SG+  G+E L+RW HP +G++ P +FI +AE TGLI  I  W
Sbjct: 643 ALTQNELEVFYQPKLCLRSGQLQGLEALLRWNHPEKGMIRPDQFISVAEETGLIIPIGKW 702

Query: 452 VLRQACRQMVQWQAQGRQLAFVGVNISSRLFGQHELYRQVAEVLHDTGLAPALLELEVTE 511
           VLR+ACR  V+  A G     + +N+S + F   +L   +A +L +  L+P  LELE+TE
Sbjct: 703 VLREACRMGVRLSALGHGKPQIAINLSPKQFSDPDLLGSIASILLEEQLSPGQLELELTE 762

Query: 512 SAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLRLKRLPVQKLKIDQGFVAGLPVD 571
           S +++  E   +QL  L+ LG+TLA+DDFGTGYSSL  LK+ P+  +KID+ F+  +P +
Sbjct: 763 SLLLDATEETRQQLIGLKALGLTLAMDDFGTGYSSLSYLKKFPIDVIKIDRSFIKDIPDN 822

Query: 572 EDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQEECQLGQGYWFGRPVPAEDL 628
           +DD+ I   +IA+AR + ++V AEGIE AEQ  FL    C +GQGY F +P+P   L
Sbjct: 823 QDDMEITSAVIAMARKLHLKVVAEGIETAEQLKFLRHHRCDIGQGYLFDKPIPGNIL 879