Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 950 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  419 bits (1077), Expect = e-121
 Identities = 225/544 (41%), Positives = 320/544 (58%)

Query: 82  ERLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKFKSGHHGLA 141
           E+ R+AA VF++  EG+++ D    ++ VN A   ++GY+++E++G+  ++         
Sbjct: 399 EQQRLAATVFEAASEGMVIMDATYRVLAVNDACCALSGYEREELLGRSIARIAGTPESQR 458

Query: 142 FYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSHYVAVFSDISAIKH 201
            Y+ +   L   G W GE+  +RKSGE+YPQW  +  +RD +  ++H VA  SD+S  + 
Sbjct: 459 QYEAMRDALERHGHWQGELIEKRKSGEVYPQWVQLREVRDSDDSVTHVVAFISDLSVRRK 518

Query: 202 SEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDLDHFQSINDGLGH 261
            E+ L YL H+D LTGL NR LF +RL +A    + N R  A+L +DLD F+ +N+ LGH
Sbjct: 519 IEERLRYLTHYDDLTGLANRGLFKERLHEACQRVRRNGRNMAVLYIDLDRFKLLNESLGH 578

Query: 262 TIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCIIERMREPF 321
              D LL+ V  RL   L    T+ARL GDEF VL++    +     L   +++R+R+P 
Sbjct: 579 EAADALLREVSRRLSTTLAEADTIARLSGDEFVVLLDAYGSLSSLAHLGSRLLQRIRKPM 638

Query: 322 QFDGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTEELTAHAQH 381
             D   L ISAS+G+SL P ++  AE LLR A+ A+ +AK  G      +T+   A + H
Sbjct: 639 VIDEQELVISASIGVSLLPDNSRDAEALLRQANIAMQQAKHLGGNTLQFFTDRPQASSMH 698

Query: 382 RVETAAELRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPRRGLVPPGEFIPIAER 441
            ++   +LR+ALE  +L V++QP   LA       E LVRW+HP  GLV P +FIP+AE 
Sbjct: 699 YLQLENQLRKALEVGQLEVFYQPRLSLADDSLEAAEALVRWRHPELGLVAPAQFIPLAEE 758

Query: 442 TGLIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRLFGQHELYRQVAEVLHDTGLA 501
           TGLI  +  +VLR+ACRQ  QWQ  G     V VN+S +   Q      V +VL +TGL 
Sbjct: 759 TGLIIPLGEFVLREACRQARQWQQDGLAAIRVSVNLSVKQLRQGNFVSLVRQVLEETGLP 818

Query: 502 PALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLRLKRLPVQKLKID 561
             +LELE+TES +++D + A+    +LR LGV LAIDDFGTG+SSL  LKR PV  +KID
Sbjct: 819 ATMLELELTESQLLDDIDNAISISEQLRALGVKLAIDDFGTGFSSLSYLKRFPVDYVKID 878

Query: 562 QGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQEECQLGQGYWFGR 621
           + F++ L     D AI R IIA+  S+  +V AEG+E   Q  FL    C   QGY    
Sbjct: 879 RSFISELEHSSQDAAITRAIIAMVHSLERKVVAEGVETQAQMDFLKANHCDEIQGYLLSP 938

Query: 622 PVPA 625
           PVPA
Sbjct: 939 PVPA 942