Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 929 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score =  381 bits (978), Expect = e-110
 Identities = 211/556 (37%), Positives = 317/556 (57%), Gaps = 3/556 (0%)

Query: 77  RCEDRERLRMAAAVFDSTLEGVLVTDR---QGLIVHVNRAFMRITGYQQDEVIGQRPSKF 133
           R    ++LR+     +++  GV++ D       +++VN AF RITGY + E++G+     
Sbjct: 362 RKASEQQLRLLKESLEASFNGVVIVDAIEPDMPVIYVNPAFERITGYSEAEMLGRNCRIL 421

Query: 134 KSGHHGLAFYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSHYVAVF 193
           +         +E+   L++       I N RK G+ +     I  I + +G ++H++ V 
Sbjct: 422 QGNERDSLQIEEIHRGLSQAENVHVVIRNFRKDGQPFWNDLYISPIFNAQGNVTHFIGVQ 481

Query: 194 SDISAIKHSEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDLDHFQ 253
           +DI+  K  E+EL++ A HD LTGLPNR +  DRL Q    A   K   A+L +DLD F+
Sbjct: 482 NDITEQKRYEEELSFSASHDVLTGLPNRAVLEDRLRQGCKMALRQKHSLAILFIDLDGFK 541

Query: 254 SINDGLGHTIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCI 313
            IND +GH  GD LL  V +R+ E +  G T+AR+GGDEF +L+ + +       +A  +
Sbjct: 542 LINDSIGHRSGDLLLVEVAQRMCEQVRAGDTVARIGGDEFIILLVDLKLENDVISIADRL 601

Query: 314 IERMREPFQFDGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTE 373
           +  +  P+   G  L ++AS+GI+L   D     QL++ AD A+YKAK  GR  Y  YT 
Sbjct: 602 LASVARPYHIQGIYLHVTASMGITLSDGDIEQPTQLIQQADLAMYKAKQEGRNNYQWYTN 661

Query: 374 ELTAHAQHRVETAAELRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPRRGLVPPG 433
           +L    + RV    EL++A+E +   +YFQP  +  SG+ +G+E L+RWQHP+ G + P 
Sbjct: 662 DLNLRLRERVHLRNELQKAIETEAFELYFQPKIEGCSGQVIGLEALLRWQHPQMGFISPA 721

Query: 434 EFIPIAERTGLIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRLFGQHELYRQVAE 493
            F+PIAE TG I  +  WVL  ACRQ+     QG     V VNIS+  F +    + V  
Sbjct: 722 TFVPIAEDTGQIIPLSQWVLETACRQLRDLLQQGIAAPSVAVNISTVQFRRINFVKSVQS 781

Query: 494 VLHDTGLAPALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLRLKRL 553
            L    L    LE+E+TE+ + ++ E A+E+L RL+ELGV ++IDDFGTG+SSL  LK L
Sbjct: 782 ALQKYQLKSEHLEIEITENVLFDNTEKAIEKLQRLKELGVNISIDDFGTGFSSLSYLKEL 841

Query: 554 PVQKLKIDQGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQEECQL 613
           P+  +KID+ FV  +  D  D AI + II++A  + + V AEG+E  +Q  FL Q  C  
Sbjct: 842 PIDTVKIDRSFVQEINTDSRDAAITQGIISMAHHLRLNVVAEGVETEQQFKFLQQSNCDQ 901

Query: 614 GQGYWFGRPVPAEDLR 629
            QGY+F +P+P E L+
Sbjct: 902 YQGYYFAKPMPFEALK 917