Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 640 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  405 bits (1042), Expect = e-117
 Identities = 239/623 (38%), Positives = 351/623 (56%), Gaps = 10/623 (1%)

Query: 11  MAALYVVLSILWLALAEVMLHSMTDDPLALTVGRQINVVVWVLLSALLIYVSRVRLLNFI 70
           +A LY +L+ LW+AL++ +   +  D   LT+ +      +V ++  L++    R L+ +
Sbjct: 18  VAGLYGLLAALWIALSDRLAALVAGDTAQLTLIQNYKGWAFVAITCTLLFFLVRRSLSRL 77

Query: 71  GHGARLRCEDRERLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRP 130
               R   E          V    L  +   DR+  I   NRA  R  G  ++ ++G  P
Sbjct: 78  QGSYRALAESEALYESLVQVMPQCLYRM---DRESRITFANRALERHLGKPREAILGHSP 134

Query: 131 SKFKSGHHGLAFYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRD----DEGEL 186
            +         + Q+    L  +GE    I     S +   + + I  ++      +G +
Sbjct: 135 REVYPADLAAKYRQDDLRVL--QGETLNLI-EEMVSLDSEQRKRYIEIVKTPTYAPDGSI 191

Query: 187 SHYVAVFSDISAIKHSEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLL 246
           +    +F DI+A K +E+++ YLAHHDPLT LPNR+L  DR  QA   A  +    A+L 
Sbjct: 192 NGIQGIFWDITARKSAEEQIEYLAHHDPLTDLPNRVLLRDRFLQAQGQAARSANRVAILF 251

Query: 247 LDLDHFQSINDGLGHTIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQA 306
           LDLDHF+ +ND LGH IGD+LL+ V ERL   +    T++R GGDEF +++        A
Sbjct: 252 LDLDHFKLVNDTLGHPIGDRLLQAVAERLRRGVRETDTISRQGGDEFVIVLPELADPESA 311

Query: 307 GKLAQCIIERMREPFQFDGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRA 366
           G +A  ++E+M EP + +G+RL ++ S+GI+LYP D    + L++ AD+A+Y AK  GR 
Sbjct: 312 GSIAGKLMEQMHEPVRVNGHRLNVTFSLGIALYPDDGEDFDTLMKKADTAMYSAKEAGRN 371

Query: 367 CYALYTEELTAHAQHRVETAAELRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPR 426
               +T  +   A  R++    L+RALE++EL +Y+QP  DLASGR +G E L+RW+ P 
Sbjct: 372 TLRFFTAAMNVEAAARLKLQNRLQRALEKEELVLYYQPQFDLASGRILGTEALLRWRDPE 431

Query: 427 RGLVPPGEFIPIAERTGLIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRLFGQHE 486
           RGLVPPGEFIP+AE TGLI  I  WV+ +ACR++ +W   G     + VN+S   F +  
Sbjct: 432 RGLVPPGEFIPVAEDTGLIGPIGEWVIGEACRELRRWHEAGATDLTMAVNLSPVQFRRSR 491

Query: 487 LYRQVAEVLHDTGLAPALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSS 546
           L    A  L +  L    LE E+TES ++ +    LE L  L+ LGV L+IDDFGTGYSS
Sbjct: 492 LVEIAARALQENRLPAECLEFELTESLLIREDAAILETLTALKGLGVKLSIDDFGTGYSS 551

Query: 547 LLRLKRLPVQKLKIDQGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFL 606
           L  LKR  V KLKIDQ F+  L  + DD AIV  +I +AR + ++  AEG+E AEQA+ L
Sbjct: 552 LAYLKRFNVDKLKIDQSFIRELCSNPDDEAIVSAVITMARQLRLRTVAEGVENAEQATML 611

Query: 607 LQEECQLGQGYWFGRPVPAEDLR 629
            + +C   QG+ FGRP+PA D +
Sbjct: 612 RRFDCDEVQGFLFGRPMPAADFQ 634