Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1104 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  433 bits (1114), Expect = e-125
 Identities = 229/553 (41%), Positives = 333/553 (60%), Gaps = 2/553 (0%)

Query: 77  RCEDRERLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKFKSG 136
           R E  E+ R+A +VF+++ +G+L+T+ +GLI+ VNRAF  +TGY ++E IGQ      SG
Sbjct: 394 RKEGEEQHRLALSVFENSHDGILITNPEGLIIEVNRAFCELTGYAREEAIGQPARMLNSG 453

Query: 137 HHGLAFYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSHYVAVFSDI 196
           HH   +++++F  ++E+G W GE+WNR KSG +     T+ A+ DD G +SH+V VFSDI
Sbjct: 454 HHDRTYFRQLFQVVSERGFWKGEMWNRTKSGAVTAVLMTVSAVHDDGGRISHFVGVFSDI 513

Query: 197 SAIKHSEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDLDHFQSIN 256
           +  K +++ L  LAH+D LTGLPNR L +DRL  A+A AQ   +  A+  LDLD F++IN
Sbjct: 514 TQQKENQRRLERLAHYDALTGLPNRTLMSDRLHLAMAQAQRRNKLLAVCYLDLDGFKAIN 573

Query: 257 DGLGHTIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCIIER 316
           D  GH  GD+LL  V ERL   L  G T ARLGGDEF +L+ +   + +  ++ + ++  
Sbjct: 574 DSHGHQAGDRLLMDVAERLRRSLRGGDTAARLGGDEFVLLLNDLTALSELEQILERLLLS 633

Query: 317 MREPFQFDGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTEELT 376
           +  PF   G    +S S+G+++YP+D   A+ L+R+AD A+Y AK +GR  Y L+  E  
Sbjct: 634 LAAPFALQGQTASVSGSIGVTIYPTDDADADTLVRHADQAMYAAKQSGRNRYQLFDTEQD 693

Query: 377 AHAQHRVETAAELRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPRRGLVPPGEFI 436
           + A+   E     R ALEQ++ R+Y+QP  +L SG  VG E L+RWQHP +G++ P  F+
Sbjct: 694 SRARSLREAIVNARAALEQEQFRLYYQPKVNLCSGLIVGFEALIRWQHPEQGILAPAAFL 753

Query: 437 PIAERTGLIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRLFGQHELYRQVAEVL- 495
              E T LI +I  WV+  A  Q+  WQA G     V +NI++R   Q +   ++   L 
Sbjct: 754 VDLEETDLIVDIGDWVMETALAQLEAWQALGWDYP-VSINIAARHLQQPDFLPRLQRALE 812

Query: 496 HDTGLAPALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLRLKRLPV 555
               + P LLELE+ E+A +ED       +   + LGV  A+DDFGTGYSSL   K LP 
Sbjct: 813 RHPAVPPRLLELEILETAALEDVGQVSLVIAACQRLGVGFALDDFGTGYSSLSYFKSLPA 872

Query: 556 QKLKIDQGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQEECQLGQ 615
           + LKIDQ FV  +  D + +AIV  ++ L  +    V AEG+E  E    LL+  C   Q
Sbjct: 873 RTLKIDQSFVRDMLHDPEALAIVEGVVGLTSAFQRSVVAEGMETVEHGVMLLRLGCIHAQ 932

Query: 616 GYWFGRPVPAEDL 628
           GY   RP+PA ++
Sbjct: 933 GYAIARPMPAAEV 945



 Score = 37.4 bits (85), Expect = 4e-06
 Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 4/137 (2%)

Query: 73  GARLRCEDRERLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSK 132
           G  +R + RE     +AVF+ T E + + D +G ++  N++ + + G Q  EV+GQ   +
Sbjct: 264 GQSIRAQLRESRLRLSAVFNQTSEFIGILDLKGRLLEANQSALDLIGRQPAEVLGQLFWE 323

Query: 133 FKSGHHGLAFYQ---EVFATLAEKGEWSG-EIWNRRKSGEIYPQWQTICAIRDDEGELSH 188
                H     Q   +    +A  GE    E+ + R+ G +      + ++ D+ G+   
Sbjct: 324 TPWWVHEPLVQQRLRQAVERVAAGGEAQRFEVTHMRRDGRLRYVDFILKSVEDEPGQPLQ 383

Query: 189 YVAVFSDISAIKHSEQE 205
            +A   DI+  K  E++
Sbjct: 384 LLAEGRDITDRKEGEEQ 400