Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 833 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  446 bits (1147), Expect = e-129
 Identities = 238/551 (43%), Positives = 335/551 (60%), Gaps = 2/551 (0%)

Query: 79  EDRERLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKFKSGHH 138
           E  E+LR+ A +F+   E V+VTD    ++ VN+AF  ITG+ + EV    P+  +    
Sbjct: 277 EREEKLRLHAKIFEHNSEAVIVTDAMQRVLSVNKAFCDITGFSEAEVRMSLPALLQPTRD 336

Query: 139 GLAFYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSHYVAVFSDISA 198
                 E+   LA  G W GE+W+RRK+G+ YP W +I ++++  G LSHY  VFSDIS 
Sbjct: 337 DPNLAAEIQVALASSGAWQGELWDRRKNGDTYPVWVSISSVKNTRGILSHYFLVFSDISE 396

Query: 199 IKHSEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDLDHFQSINDG 258
            K +E+++  LA++D LTGLPNR L    LEQAL  AQ N+   A+L +DLD F++IND 
Sbjct: 397 RKEAERQIYRLAYYDALTGLPNRSLLFSLLEQALIEAQRNQTHGAVLFVDLDRFKTINDS 456

Query: 259 LGHTIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCIIERMR 318
            GH   D LLK V  RL E L     +ARLGGDEF V + +  +   A  + Q I++ + 
Sbjct: 457 FGHAPADALLKEVARRLQETLRAEDVVARLGGDEFIVALFDITKREHAALVGQKILDALA 516

Query: 319 EPFQFDGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTEELTAH 378
           EPFQ   + + ++AS+GI+++P D   AE LLRNAD+A+Y+ K         Y++E+   
Sbjct: 517 EPFQIVHHEVLLTASIGIAVFPDDGRDAETLLRNADTAMYRVKQTSGG-PLFYSQEMNLR 575

Query: 379 AQHRVETAAELRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPRRGLVPPGEFIPI 438
           +  R++    LR+A+E+ E R+Y+QP  +LA+GR VG E L+RW HP +G++PP  FIP+
Sbjct: 576 SLERLKLEGALRKAVERQEFRLYYQPQVELATGRIVGAEALIRWHHPEQGMIPPTAFIPL 635

Query: 439 AERTGLIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRLFGQHELYRQVAEVLHDT 498
           AE TGLI  I  WVL  ACRQ   W+  G +   + VN+S R F +  L + V E L   
Sbjct: 636 AEETGLIVSIGAWVLDAACRQGRLWREAGYEDLTIAVNLSPRQF-RPGLSQLVNETLERH 694

Query: 499 GLAPALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLRLKRLPVQKL 558
                 LELE+TE  +M + E  ++ L    + GV LA+DDFGTGYSSL  LK+ P+  L
Sbjct: 695 AFPGENLELEITEGMLMHNSEAVIQMLEDFHQAGVRLALDDFGTGYSSLAYLKKFPIDNL 754

Query: 559 KIDQGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQEECQLGQGYW 618
           KID+ FV+G+P D DD AI + II++A+++ + V AEG+E  EQ  FL    C   QGY 
Sbjct: 755 KIDRSFVSGIPHDGDDSAIAKAIISMAKNLRLLVIAEGVETEEQLDFLRAAGCDEIQGYL 814

Query: 619 FGRPVPAEDLR 629
           F  PVP ED +
Sbjct: 815 FSPPVPVEDFQ 825



 Score = 40.8 bits (94), Expect = 2e-07
 Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 11/170 (6%)

Query: 76  LRCEDRERLRMA----AAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPS 131
           LR ED  R+       + + D   + V+  D  G I+  N+   R+ GY   E +G R  
Sbjct: 145 LRQEDLARMEAKVEEQSQILDHIHDSVITMDLSGYIMGWNKGAERLFGYTAAEAVG-RHI 203

Query: 132 KFKSGHHGLAFYQE----VFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELS 187
            F     G    +E     +    + G    E+  R+KSGE++    ++   R++ GE +
Sbjct: 204 LFLYADDGSETLEEEDDLFYNAFLDHGRREFEVRRRKKSGEVFWASVSLSLSRNEAGEPA 263

Query: 188 HYVAVFSDISAIKHSEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQA 237
             +    DI+     E++L    H          ++ TD +++ L+  +A
Sbjct: 264 GLIGYLVDITNQLEREEKLR--LHAKIFEHNSEAVIVTDAMQRVLSVNKA 311