Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 889 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  420 bits (1079), Expect = e-121
 Identities = 237/582 (40%), Positives = 329/582 (56%), Gaps = 4/582 (0%)

Query: 48  VVVWVLLSALLIYV-SRVRLLNFIGHGARLRCEDRERLRMAAAVFDSTLEGVLVTDRQGL 106
           V+   LL  +L++  S VR ++          E   R+R   A+ DS  +   + D    
Sbjct: 296 VLALALLGLILVWQRSYVRAVSMAHTMTNAYDESSSRIR---ALLDSIPDLAWIKDNAFR 352

Query: 107 IVHVNRAFMRITGYQQDEVIGQRPSKFKSGHHGLAFYQEVFATLAEKGEWSGEIWNRRKS 166
              VN A+ R+ G   +E++G+   +         F     A LA       E+      
Sbjct: 353 FHAVNEAYARMCGKPAEEIVGKTVFQVWPEALARTFQNHDEAVLASGKPGHFEVLVTNGE 412

Query: 167 GEIYPQWQTICAIRDDEGELSHYVAVFSDISAIKHSEQELAYLAHHDPLTGLPNRLLFTD 226
           G+          + ++EGE+     +  DI+  K +E  + +LA HD LT LPNR L + 
Sbjct: 413 GQPRTLDYIRVPVHNEEGEVVGMAGIARDITERKEAEARIRHLAEHDALTDLPNRSLLSS 472

Query: 227 RLEQALAAAQANKRGCALLLLDLDHFQSINDGLGHTIGDQLLKLVGERLGEVLGNGVTLA 286
           R+  A+  +  ++   ALLLLDLDHF++IND LGH +GD+LL+L  ERL   L    TL+
Sbjct: 473 RMADAINRSVGSQAPMALLLLDLDHFKNINDSLGHEVGDKLLQLAAERLRHTLDAADTLS 532

Query: 287 RLGGDEFGVLVENCQQVGQAGKLAQCIIERMREPFQFDGNRLFISASVGISLYPSDALGA 346
           R GGDEF +L+  C      G++AQ ++E M +PF  DG+ L +SASVGIS+YP D    
Sbjct: 533 RSGGDEFAILLTECSGAPMIGRIAQRLLETMAQPFNVDGHELVLSASVGISMYPHDGTDL 592

Query: 347 EQLLRNADSALYKAKSNGRACYALYTEELTAHAQHRVETAAELRRALEQDELRVYFQPVH 406
             LL+NAD+A+Y AK+ GR  Y  +T E+ A    R+     LR+AL + EL +Y+QP +
Sbjct: 593 GALLKNADAAMYSAKAAGRNTYQFFTPEMNARVFERLSLENSLRKALPRQELMLYYQPQY 652

Query: 407 DLASGRQVGVETLVRWQHPRRGLVPPGEFIPIAERTGLIAEIDTWVLRQACRQMVQWQAQ 466
            +  G  +G E L+RW+HP  GLVPP  FIPIAE T LI  I  WVL +ACRQ + WQ  
Sbjct: 653 RVGGGDPIGFEALLRWRHPELGLVPPARFIPIAEETNLILPIGEWVLAEACRQQMAWQRA 712

Query: 467 GRQLAFVGVNISSRLFGQHELYRQVAEVLHDTGLAPALLELEVTESAVMEDPEVALEQLH 526
           G+    V VN+S   F Q  L   V  VL +TGL  A LELE+TES +M+D E A+E LH
Sbjct: 713 GQPATTVAVNLSPVQFRQRNLVSLVQRVLAETGLPAAQLELEITESLLMDDTERAVEVLH 772

Query: 527 RLRELGVTLAIDDFGTGYSSLLRLKRLPVQKLKIDQGFVAGLPVDEDDIAIVRVIIALAR 586
            L+ LG+ L++DDFGTGYSSL  LKR P+ K+KIDQ FV  +  D  D AI++ IIA+A 
Sbjct: 773 ELKSLGIRLSLDDFGTGYSSLSYLKRFPLDKIKIDQSFVRDMIKDSGDAAIIQAIIAIAA 832

Query: 587 SMGMQVHAEGIEQAEQASFLLQEECQLGQGYWFGRPVPAEDL 628
            + + V AEG+E   Q  +L   +C   QGY F  PVPA ++
Sbjct: 833 KLELGVIAEGVENQSQLDYLALHQCGEVQGYLFSPPVPAAEV 874