Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1158 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  522 bits (1345), Expect = e-152
 Identities = 264/569 (46%), Positives = 366/569 (64%), Gaps = 2/569 (0%)

Query: 65   RLLNFIGHGARLRCEDRERLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDE 124
            RLL  I H    R    E+LR++A VF+   EG+++ DR   I+ VNRAF+ ITGY + E
Sbjct: 587  RLLYSIIHDITARRRAEEQLRLSAKVFEGASEGIVICDRNNRIMSVNRAFVEITGYAEAE 646

Query: 125  VIGQRPSKFKSGHHGLAFYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEG 184
            V G+ P    SG H  AF+  ++  L   G W GEIWNRRK GE+YP+W +I  +RD+ G
Sbjct: 647  VQGRDPRVLNSGRHDAAFFANLWHHLKTAGTWQGEIWNRRKGGEVYPEWLSITTVRDEAG 706

Query: 185  ELSHYVAVFSDISAIKHSEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCAL 244
            E+S+YVAVF+D+S  K +E+ + +LA HD LTGLPNR L  DRL+QA+A A+ N    AL
Sbjct: 707  EVSNYVAVFADVSERKRNEEHIRFLAEHDYLTGLPNRSLLHDRLQQAIALAERNSESLAL 766

Query: 245  LLLDLDHFQSINDGLGHTIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVG 304
            + +DLD F++IND LGH +GDQLL+ VG R+   + +  T++R GGDEF +L+ + +   
Sbjct: 767  MFIDLDRFKNINDSLGHQVGDQLLQEVGRRIQACVRSADTVSRPGGDEFIILLPSIETPQ 826

Query: 305  QAGKLAQCIIERMREPFQFDGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNG 364
             A ++A+ ++E +  P+Q  G+ L I+AS+GI+++P D    + L++NAD+A+Y +K  G
Sbjct: 827  DAARVAEKLLESLNRPYQLGGHELVITASIGIAVFPEDGRDFQTLVKNADAAMYYSKEAG 886

Query: 365  RACYALYTEELTAHAQHRVETAAELRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQH 424
            R  +  +T ++ A    R+     LRRALE+ E  +Y+QP  D+ SGR +G E L+RWQH
Sbjct: 887  RDSFHFFTPDMNARVFERLSLENSLRRALERQEFLLYYQPQVDMPSGRVIGFEALIRWQH 946

Query: 425  PRRGLVPPGEFIPIAERTGLIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRLFGQ 484
            P+ GLV P  FIP+AE +GLI  I  WVL +ACRQ   WQ QG     V VNIS+  F Q
Sbjct: 947  PQMGLVSPARFIPVAEDSGLIVPIGEWVLGEACRQNRAWQEQGMPAVPVAVNISALQFRQ 1006

Query: 485  HELYRQVAEVLHDTGLAPALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGY 544
             +    V   L ++GL PA LELE+TES ++   + A + L RL+  GV L+IDDFGTGY
Sbjct: 1007 PQFEASVERALAESGLEPAWLELELTESMMLHQGQGATDLLDRLKARGVRLSIDDFGTGY 1066

Query: 545  SSLLRLKRLPVQKLKIDQGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQAS 604
            SSL  LKRLP+ KLKIDQ FV  +  D    AI   II +A ++G+ V AEG+E   Q  
Sbjct: 1067 SSLAYLKRLPLDKLKIDQAFVRDIASDAGGAAITATIIQMAHNLGLSVIAEGVETEAQLE 1126

Query: 605  FLLQEECQLGQGYWFGRPVPAEDLR--WD 631
            FL   +C   QG++F RP+PA D+R  WD
Sbjct: 1127 FLQAHDCASAQGFYFARPMPAADIRAFWD 1155



 Score = 27.7 bits (60), Expect = 0.003
 Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 83  RLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKFKSGHHGLA- 141
           R+    ++FD++   V+   R   ++  NRAF R+ G   +  +GQ    +       A 
Sbjct: 361 RIAEMESIFDAS-PVVIGVVRDRCLIQANRAFERLFGVSLETALGQTVVGYYPTPEEFAD 419

Query: 142 FYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSH-YVAVFSDISAIK 200
           F Q+++  +A+          RR  G ++  W    A + D  +     + V  D+   +
Sbjct: 420 FGQQLYPAVADGRVAHFLRRFRRADGTLF--WANFYARQIDAQQPQRGIIIVIEDVDQAR 477

Query: 201 HSEQEL 206
           H E+ L
Sbjct: 478 HQEEVL 483