Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 972 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  477 bits (1228), Expect = e-139
 Identities = 254/547 (46%), Positives = 347/547 (63%), Gaps = 1/547 (0%)

Query: 83  RLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKF-KSGHHGLA 141
           RL +AA VFDS  E ++VTD +G I  VN AF  +TGY + +  G+ P     SG H  A
Sbjct: 410 RLHLAARVFDSLGEAMVVTDARGRIQSVNPAFSEVTGYSEADARGRAPGHILASGQHDPA 469

Query: 142 FYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSHYVAVFSDISAIKH 201
           FY +++ +L E+G+W GE+ NRRKSGE YP+W +I AI+D  G++S YV +F+DI+  K 
Sbjct: 470 FYAQMWQSLQEQGKWQGEVINRRKSGETYPEWLSITAIKDGAGQVSQYVGLFTDITDRKQ 529

Query: 202 SEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDLDHFQSINDGLGH 261
           +E  + +LA+HDPLTGLPNR LF DRLE AL  A  ++R  A+LLLDLD F+++ND LGH
Sbjct: 530 AEAHIHHLAYHDPLTGLPNRRLFYDRLENALRQAHRSRRKLAVLLLDLDRFKAVNDTLGH 589

Query: 262 TIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCIIERMREPF 321
             GD LLK VG RL   L  G TLARLGGDEF +L+        A  +A  ++ +  +P 
Sbjct: 590 DQGDLLLKEVGARLSLCLREGDTLARLGGDEFVLLLPEVLSAEDASIVAGKLLAQFDQPV 649

Query: 322 QFDGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTEELTAHAQH 381
           +     +F S S+GI+LYP+D    E LL++AD A+Y AK  GRA Y  +       +  
Sbjct: 650 RLGEREIFASTSIGIALYPADGEDGESLLKHADVAMYAAKDGGRAAYRFFIASHNERSLE 709

Query: 382 RVETAAELRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPRRGLVPPGEFIPIAER 441
           R+E   +LRRA+E ++L +Y+QP    +SGR  GVE LVRW+HP RGLV P  FI +AE 
Sbjct: 710 RLELENDLRRAVEGEQLLLYYQPQIGASSGRIAGVEALVRWRHPTRGLVMPDSFIALAEN 769

Query: 442 TGLIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRLFGQHELYRQVAEVLHDTGLA 501
            GLI  I  W L  ACRQ+  WQ QG  +  V VN+S+R   + +  ++V +V+  +G+ 
Sbjct: 770 AGLIDAIGHWCLVAACRQLRAWQEQGVPVPRVAVNVSARQLRRWDFAQEVLQVVTQSGID 829

Query: 502 PALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLRLKRLPVQKLKID 561
           PA LELE+TES++ +DPE  L     LR+ GV ++IDDFGTGYSSL  L R PV ++KID
Sbjct: 830 PAGLELELTESSLADDPEQILAIFSTLRQAGVRVSIDDFGTGYSSLSYLSRYPVDEVKID 889

Query: 562 QGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQEECQLGQGYWFGR 621
           + FV+ L  D +  ++VR +I LA  +GM+  AEG+E   Q   L   +C   QGY F +
Sbjct: 890 RSFVSRLLDDREARSVVRAVILLAHGLGMRTVAEGVETEAQWQVLSDLDCDELQGYLFSK 949

Query: 622 PVPAEDL 628
           PVP   +
Sbjct: 950 PVPPHQI 956



 Score = 39.7 bits (91), Expect = 6e-07
 Identities = 46/195 (23%), Positives = 67/195 (34%), Gaps = 25/195 (12%)

Query: 90  VFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKFKSGHHGLAFYQEVFAT 149
           + ++  EG+L  DR G I   N+    + G     ++G+  +         A    +   
Sbjct: 293 IANTLAEGILALDRGGRITFANQRAEALLGAAPGGLLGRDAATVLWPGAAPAEVSGLARA 352

Query: 150 LAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSH--YVAVFSDISAIKHSEQELA 207
           LA    + GE    R  G  +P       +R  EG+     YVA F DIS IK +E  L 
Sbjct: 353 LATGAVFEGEDDFVRSDGSAFPVAVLGAPLRGGEGDADQAGYVASFRDISEIKQAEARLH 412

Query: 208 YLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDLDHFQSINDGLGHTIGDQL 267
             A               D L +A+    A  R            QS+N       G   
Sbjct: 413 LAAR------------VFDSLGEAMVVTDARGR-----------IQSVNPAFSEVTGYSE 449

Query: 268 LKLVGERLGEVLGNG 282
               G   G +L +G
Sbjct: 450 ADARGRAPGHILASG 464