Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 998 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  392 bits (1006), Expect = e-113
 Identities = 215/547 (39%), Positives = 314/547 (57%), Gaps = 1/547 (0%)

Query: 82  ERLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKFKSGHHGLA 141
           E L+++A V+D++ E + V D  G+I+ VN AF  ITGY + E+ GQ         +G  
Sbjct: 444 ESLKLSALVYDNSSEAMSVLDENGVIITVNAAFTDITGYSESEIRGQHIRMMYCDLNGHE 503

Query: 142 FYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSHYVAVFSDISAIKH 201
           FYQ++   +  KGEW GE+  RR++ E Y  W TI  I+D +G     VA+FSDI+  K 
Sbjct: 504 FYQQMNDDIRNKGEWQGEMRQRRRNNEEYVIWLTINTIKDKDGLPHRRVALFSDITDKKQ 563

Query: 202 SEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDLDHFQSINDGLGH 261
           SE  +   A++D LTGLPNR +  + L   +  A  N+   AL+ LDLD+F+ +ND LGH
Sbjct: 564 SEHLIWKQANYDTLTGLPNRRMLLEYLSAEIKTADRNRNHFALMFLDLDYFKEVNDTLGH 623

Query: 262 TIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCIIERMREPF 321
            +GD LL     RL   + +   +ARLGGDEF V++ +        ++A+ I+ R+ EP+
Sbjct: 624 AMGDLLLIETASRLKSCVRDADVVARLGGDEFTVVLSSMADHKGIERVAEHILRRIAEPY 683

Query: 322 QFDGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTEELTAHAQH 381
                   ISAS+GI+LYP D+   E LL++AD A+Y AK  GR  +  +T  +  +A++
Sbjct: 684 YLGEETTHISASIGITLYPDDSPSIEGLLKHADQAMYAAKDQGRNRFNYFTPSMQEYAKY 743

Query: 382 RVETAAELRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPRRGLVPPGEFIPIAER 441
           R+    +LR+A+   E  +++QP+  +A+G  +  E L+RW HP RG V P EFIP+AE 
Sbjct: 744 RMRLIHDLRQAVLNKEFELHYQPIVTMATGEVLKAEALLRWFHPERGSVSPAEFIPVAED 803

Query: 442 TGLIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRLF-GQHELYRQVAEVLHDTGL 500
           TGLI EI  WV  QA RQ  QW+        + VN S   F  +  L     E+L    +
Sbjct: 804 TGLIVEIGNWVFEQAARQSAQWRKTLGVEIQISVNKSPIQFRDEGALLHNWLELLQQLDV 863

Query: 501 APALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLRLKRLPVQKLKI 560
             A + +E+TE  +++      E+L   R+ GV +++DDFGTGYSSL  LK+  +  LKI
Sbjct: 864 TGAGVCVEITEGLLLDASMGVTEKLLAYRDAGVQVSLDDFGTGYSSLAYLKKFDIDYLKI 923

Query: 561 DQGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQEECQLGQGYWFG 620
           DQ F   +  DE+D  +   II +A  +GM+V AEG+E   Q   LL+  C  GQGY F 
Sbjct: 924 DQSFTRNIDTDENDHTLCEAIIVMAHKLGMKVIAEGVETEAQRQVLLRAGCDYGQGYLFS 983

Query: 621 RPVPAED 627
           +PV A +
Sbjct: 984 KPVSASE 990