Pairwise Alignments

Query, 342 a.a., putative sensory box/GGDEF family protein from Pseudomonas putida KT2440

Subject, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  122 bits (306), Expect = 3e-32
 Identities = 99/296 (33%), Positives = 148/296 (50%), Gaps = 29/296 (9%)

Query: 53  QLFSSLLDSVNAVLWAFDWETRQVLYVSPAYERIFGRPVSLVLADYNEWRDSIYPDDLEF 112
           +L  + +D ++AV+   D + R ++ V+  + R+ G        D    + SI+   L  
Sbjct: 355 KLARAAMDGMSAVVIT-DRQNR-IIKVNNEFTRLSG----YTFEDVKGKQPSIFASGLHK 408

Query: 113 AE--RSLAQVLLKGAVEDREYRILNADGQLRWLSDKCYINQQHDSDRVIIVGIAE--DIT 168
            E    + + L    V + E      DG+   +++   I    D D VI   +A   DI+
Sbjct: 409 VEFYMQMWKALQDNGVWEGEVINKRKDGES--ITEILRIQSIRDEDNVIQFYVASFVDIS 466

Query: 169 EKKQLEGELQRLATTDVLTQSSNRRHF-----FECAQQAFDSAREDGTPLAFLLLDIDDF 223
            +K LE  L+ L+  D LT   NRR F      ECA++       D       ++DID F
Sbjct: 467 HRKALENRLRELSEKDALTDLWNRRKFDQTISLECAKRR---RYPDQAQSCLAIIDIDHF 523

Query: 224 KRINDSYGHQEGDQVLQHIADSGKAVLRRGDLFGRIGGEEFAAVFPGCTAQIAEQIAERL 283
           KRIND +GH EGD VL+ +A   +  LR  D   RIGGEEFA +FP  + + AEQ+  R+
Sbjct: 524 KRINDKFGHNEGDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIFPYTSIEEAEQVLNRV 583

Query: 284 QRQIQHLSFSHGQQTYGVTVSQGLTGLTDEDVALDSLYARADAAMYQAKRQGKNQI 339
           +    H++  H QQ   VT+S    G+TD   + D  Y RAD A+Y++K  G+NQI
Sbjct: 584 R---LHIASLHHQQ---VTLS---GGVTDVCTSPDQSYKRADLALYESKTSGRNQI 630