Pairwise Alignments

Query, 342 a.a., putative sensory box/GGDEF family protein from Pseudomonas putida KT2440

Subject, 450 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) from Rhodospirillum rubrum S1H

 Score =  135 bits (341), Expect = 2e-36
 Identities = 98/318 (30%), Positives = 148/318 (46%), Gaps = 25/318 (7%)

Query: 35  LLALLHAQGEVARLSERDQLFSSLLDSVNAVLWAFDWETRQVLYVSPAYERIFGRPVSLV 94
           LL  L    E+ RL E ++ F++        +W ++ ET +V +    +  +FG   + +
Sbjct: 140 LLRDLSDAQELERLRETEERFNASQRFGRIGVWDWNTETNEVFWSEEVFP-MFGFTPAEI 198

Query: 95  LADYNEWRDSIYPDDLEFAERSLAQVLLKGAVEDREYRILNADGQLRWLSDKCYINQQHD 154
              Y+ +   ++PDD      S    L    + D+EYR++  DG + W+ +   + ++ D
Sbjct: 199 TPTYDLFIAMVHPDDFVALTDSERACLSGTTLHDQEYRVIWRDGSVHWIRETADVLRESD 258

Query: 155 SDRVIIVGIAEDITEKKQLEGELQRLATTDVLTQSSNRRHFFECAQQAFDSAREDGT--P 212
                +VG+  ++TE+K+ + +  R+A  D LT   NR  F E  +       E G   P
Sbjct: 259 GTPRRMVGVIREVTEEKEAQRQALRIAMLDPLTGLPNRATFLERLEADLGQVDETGVAVP 318

Query: 213 LAFLLLDIDDFKRINDSYGHQEGDQVLQHIADSGKAVLRRGDLFGRIGGEEFAAVFPGC- 271
           LA   +D+DDFK IND+YGH  GD+VL  IA      +R  D+  R+GG+EF A+  GC 
Sbjct: 319 LALAFIDLDDFKPINDTYGHLMGDRVLMTIAKRLSEAVRPQDMVARVGGDEFVALLRGCR 378

Query: 272 TAQIAEQIAERL----------QRQIQHLSFSHGQQTYGVTVSQGLTGLTDEDVALDSLY 321
               A  +A RL             I  +  S G   Y   VS G           D L 
Sbjct: 379 DGARARTVAARLLDAVTAPVSIDTVIHRVRASIGISLYPSLVSTG-----------DDLI 427

Query: 322 ARADAAMYQAKRQGKNQI 339
           A AD AMY AKR G + I
Sbjct: 428 ATADQAMYVAKRAGGDPI 445