Pairwise Alignments

Query, 342 a.a., putative sensory box/GGDEF family protein from Pseudomonas putida KT2440

Subject, 638 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  144 bits (363), Expect = 6e-39
 Identities = 105/296 (35%), Positives = 150/296 (50%), Gaps = 5/296 (1%)

Query: 46  ARLSERDQLFSSLLDSVNAVLWAFDWETRQVLYVSPAYERIFG-RPVSLVLADYNEWR-D 103
           A L +R+    + +D+    +   D E R+VL  + A ER+FG R   L+     E+  +
Sbjct: 336 AELRQREAQARTFMDTAMDAVVVLDQE-RRVLEFNRAAERLFGFRAEELLGRSVEEFMPE 394

Query: 104 SIYPDDLEFAERSLAQVLLKGAVEDREYRILNADGQLRWLSDKCYINQQHDSDRVIIVGI 163
              P        + A     GA   RE     ADG  R    +  I     +   + VGI
Sbjct: 395 QTVPIHRALLAEAAAGHAADGAGHGREMLARAADG--REFPVEVSIGSTELAGGRVFVGI 452

Query: 164 AEDITEKKQLEGELQRLATTDVLTQSSNRRHFFECAQQAFDSAREDGTPLAFLLLDIDDF 223
             DI+E+K +E ELQRLATTD LT   NRR F   A++    AR    PLA  +LD D F
Sbjct: 453 LRDISERKAVEEELQRLATTDGLTGILNRRAFTAEAERLVALARRHDHPLALFILDADKF 512

Query: 224 KRINDSYGHQEGDQVLQHIADSGKAVLRRGDLFGRIGGEEFAAVFPGCTAQIAEQIAERL 283
           K INDS+GH  GDQVLQ +  +    LR+ D+FGR+GGEEF  + P      A Q+ +RL
Sbjct: 513 KNINDSHGHPVGDQVLQALVRAIGGGLRQSDVFGRLGGEEFGLLLPQTPPAGAHQLGQRL 572

Query: 284 QRQIQHLSFSHGQQTYGVTVSQGLTGLTDEDVALDSLYARADAAMYQAKRQGKNQI 339
            + ++ +     Q     +VS G + L      L+++  RADAA+Y AK  G++++
Sbjct: 573 LQAVRQVRLPLAQGELSFSVSIGASLLAGPGDDLEAMMHRADAALYAAKAGGRDRL 628