Pairwise Alignments

Query, 321 a.a., putative Phycobiliprotein from Pseudomonas putida KT2440

Subject, 234 a.a., PBS lyase HEAT-like repeat from Synechococcus elongatus PCC 7942

 Score = 64.3 bits (155), Expect = 3e-15
 Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 3/200 (1%)

Query: 89  RLAAAQSLSELKSLEAGQLILPWVKHADAFVRASALRALRELRLEDAADPALLAL--ADD 146
           RL A  SL ++++ +A  LI   +      VR+ A+ AL   +  +   P LL +   +D
Sbjct: 21  RLIALASLRDVEAEDAVPLIKKVLADESIQVRSMAVFALGIKQTAECL-PLLLEVLETED 79

Query: 147 AAAVRREAVGILGWLKHQPALLALAALAETEPDTEVRRAAIGALGLARDSSVLPALVAAL 206
              +R  A G LG+L+   AL  L  +   +    VR +A  ALG  ++     AL+ AL
Sbjct: 80  DYGIRASAAGALGYLQDDQALEPLLRVFYEDTSWLVRFSAAVALGNLQNPRARDALIQAL 139

Query: 207 TDQAWQVREEAATTLGKVGQDQAGPALVDALADDFWQVRLRAARSLGRLRYAAALDALGG 266
             +   + + A   LG++G   A   L+  +A + W VR R A +LG+L    AL AL  
Sbjct: 140 DSEEVLLHQAAIAALGEIGAVDAVDQLLRFVAAEDWLVRQRLAEALGKLPCDKALSALRY 199

Query: 267 LLGHGIANLRKEAALALGEL 286
           L+      +   A  AL +L
Sbjct: 200 LVKDSHPQVSAAAEQALQQL 219



 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 72/250 (28%), Positives = 110/250 (44%), Gaps = 33/250 (13%)

Query: 7   DNPDILALLPRLDASDAGVRRIALIELADLEDPDGLPWLTDALLADAAAEVRAEAARLLE 66
           D  D+  L  +L++  +  R IAL  L D+E  D +P L   +LAD + +VR+ A   L 
Sbjct: 2   DAIDLAQLASQLESEQSRDRLIALASLRDVEAEDAVP-LIKKVLADESIQVRSMAVFALG 60

Query: 67  AWEEPEVVQALCAALADAAEPVRLAAAQSLSELKSLEAGQLILPWVKHADAFVRASALRA 126
             +  E +  L                     L+ LE            D  +RASA  A
Sbjct: 61  IKQTAECLPLL---------------------LEVLET---------EDDYGIRASAAGA 90

Query: 127 LRELRLEDAADPALLALADDAA-AVRREAVGILGWLKHQPALLALAALAETEPDTEVRRA 185
           L  L+ + A +P L    +D +  VR  A   LG L++  A  AL    ++E +  + +A
Sbjct: 91  LGYLQDDQALEPLLRVFYEDTSWLVRFSAAVALGNLQNPRARDALIQALDSE-EVLLHQA 149

Query: 186 AIGALGLARDSSVLPALVAALTDQAWQVREEAATTLGKVGQDQAGPALVDALADDFWQVR 245
           AI ALG       +  L+  +  + W VR+  A  LGK+  D+A  AL   + D   QV 
Sbjct: 150 AIAALGEIGAVDAVDQLLRFVAAEDWLVRQRLAEALGKLPCDKALSALRYLVKDSHPQVS 209

Query: 246 LRAARSLGRL 255
             A ++L +L
Sbjct: 210 AAAEQALQQL 219



 Score = 40.0 bits (92), Expect = 5e-08
 Identities = 46/173 (26%), Positives = 68/173 (39%), Gaps = 11/173 (6%)

Query: 9   PDILALLPRLDASDAGVRRIALIELADLEDPDGLPWLTDALLADAAAEVRAEAARLLEAW 68
           P +L +L   D  D G+R  A   L  L+D   L  L      D +  VR  AA  L   
Sbjct: 69  PLLLEVLETED--DYGIRASAAGALGYLQDDQALEPLLRVFYEDTSWLVRFSAAVALGNL 126

Query: 69  EEPEVVQALCAALADAAEPVRLAAAQSLSELKSLEAGQLILPWVKHADAFVRASALRALR 128
           + P    AL  AL      +  AA  +L E+ +++A   +L +V   D  VR     AL 
Sbjct: 127 QNPRARDALIQALDSEEVLLHQAAIAALGEIGAVDAVDQLLRFVAAEDWLVRQRLAEALG 186

Query: 129 ELRLEDAADPALLALADDAAAVRREAVGILGWLKHQPALLALAALAETEPDTE 181
           +L  + A       + D    V   A         + AL  L     T+P+++
Sbjct: 187 KLPCDKALSALRYLVKDSHPQVSAAA---------EQALQQLETGTTTQPESD 230