Pairwise Alignments

Query, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 263 a.a., nitrate transport permease from Synechococcus elongatus PCC 7942

 Score =  158 bits (399), Expect = 1e-43
 Identities = 88/245 (35%), Positives = 133/245 (54%), Gaps = 25/245 (10%)

Query: 7   RWPVRLASLLACLLFWQVAA-------------NVKMDL-GLLTFTYVPTPKAVLDAAWQ 52
           RW V + S+LA L  WQ+AA                 DL G L+  +       L   W 
Sbjct: 11  RWAVSILSVLAFLAIWQIAAASGFLGKTFPGSLRTLQDLFGWLSDPFFDNGPNDLGIGWN 70

Query: 53  LLTSSTLLAHLGSSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVA 112
           LL S          L RV  GY  A +V + LG+ IG S  A     P +++L+P+  +A
Sbjct: 71  LLIS----------LRRVAIGYLLATVVAIPLGIAIGMSALASSIFSPFVQLLKPVSPLA 120

Query: 113 WIPLAILMFPSSELSMVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILRE 172
           W+P+ + +F  SEL+ VF+    +L+P L+NT  GV  V+P  +  ++SLGA RW  + +
Sbjct: 121 WLPIGLFLFRDSELTGVFVILISSLWPTLINTAFGVANVNPDFLKVSQSLGASRWRTILK 180

Query: 173 VVLPGALPSIVTGLAIGMGTSWFCLVTAEMISGQFGIGYYTWESYTLQNYPDIVVGMLLI 232
           V+LP ALPSI+ G+ I MG +W  +V AEM+ G  GIGY+ W  +   + P+I   +++I
Sbjct: 181 VILPAALPSIIAGMRISMGIAWLVIVAAEMLLGT-GIGYFIWNEWNNLSLPNIFSAIIII 239

Query: 233 GVLGM 237
           G++G+
Sbjct: 240 GIVGI 244