Pairwise Alignments

Query, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 278 a.a., nitrate transport permease from Synechococcus elongatus PCC 7942

 Score =  134 bits (337), Expect = 2e-36
 Identities = 82/255 (32%), Positives = 134/255 (52%), Gaps = 32/255 (12%)

Query: 5   LKRWPVRL-------ASLLACLLFWQV-----AANVKMDLGLLT-------FTYVPTPKA 45
           LK+W  +L       A +L  L+ WQ+     A  +   L L T         Y    + 
Sbjct: 17  LKKWRQKLDGILLPLAGILGFLIIWQIFSSSGATRLPGPLSLFTEERTRELLLYPFLDRG 76

Query: 46  VLDAA--WQLLTSSTLLAHLGSSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPLE 103
            LD    WQ +          +SL RV  G++ AA++G+++G+L+G ++     L P  +
Sbjct: 77  GLDKGLFWQTI----------ASLTRVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQ 126

Query: 104 VLRPIPAVAWIPLAILMFPSSELSMVFITFTGALFPILLNTVHGVEAVDPRLVASARSLG 163
            LR I  +AW+P+A++ F  ++ + +F+ F  A++PIL+NT  GV  +       AR L 
Sbjct: 127 FLRMIAPLAWVPIALVAFQQNQPAAIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLR 186

Query: 164 AGRWAILREVVLPGALPSIVTGLAIGMGTSWFCLVTAEMI-SGQFGIGYYTWESYTLQNY 222
             +   L +VVLP ALP I TGL I +G SW  ++ AE++ SG  GIG++ W++Y     
Sbjct: 187 MSKSKYLMKVVLPAALPYIFTGLRIAIGLSWLAIIAAEIVMSGIVGIGFFIWDAYQQNYV 246

Query: 223 PDIVVGMLLIGVLGM 237
            DI++ ++ IG +G+
Sbjct: 247 SDIILAVIYIGAVGL 261