Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 344 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 88/343 (25%), Positives = 141/343 (41%), Gaps = 33/343 (9%)

Query: 4   VATVAGLALALTGLNASAETIRIAIGTQDTTINCATGGL---LIRELGLLDKYLPHDGKY 60
           +  +AGLA A  G  A  + IRI         + A G L   L R   LL+     +G  
Sbjct: 22  ILPIAGLAPASAG-EAKPDAIRIG--------STAPGHLKFILYRHKKLLEDEFSKEG-- 70

Query: 61  KDATYQVEWKNFTSGAPLTNEMVAGKLDFGAMADFPGSFNGVAHLDAGKRSLFISVLSGS 120
                ++E   F  G+  T  + +G LDF  + + P        L A    + +  LS  
Sbjct: 71  ----IKIELTTFDGGSAATVALGSGALDFTYIGNNPS-----LRLAATGADVKLIGLSSW 121

Query: 121 VHGSGNGIVVPAASSVQSLAELKGKTISVPFASTAHGMLLRAVAAQGWDPQKDVRIIAQA 180
              +   IVV   S ++ + +LKGK ++    +  H    +A+ A G     DV  +   
Sbjct: 122 NRSNETQIVVKPDSPIRKIEDLKGKKVAYLSGTVRHSTFAKALKAAGLSIG-DVESLNLG 180

Query: 181 PEIAGSALRSNRIEAHADFVPFAELFPNRGFARKIYDGAQANAPTF---HGALVDADYAK 237
            E +G AL    ++A  +     +     G AR I+D   + +P +   H   V+ D+A+
Sbjct: 181 IESSGPALARGDVDAIVESTGPVQKLVEEGQARVIFDAGVSGSPEWAVPHLISVNGDFAR 240

Query: 238 KYPEVVTAYLRASLEADRLIAAQPEKYSELIEKVTGIEAEVNYLFHGPLGLQTRDLTWKP 297
           KYP++V   L   + A R   A PE+   +  K TG  +++      P G   +D    P
Sbjct: 241 KYPQIVARLLAVDVAAARWADANPEETIAIFVKETG-NSDMAVRATYPNGKFYQD----P 295

Query: 298 EYRQAVATSIDTLKLLKKTDRGLDTGKFIDDQYIRAAFKEAGL 340
           E   A   ++   +     D GL  GK     +I  +F EA +
Sbjct: 296 EITDAAVRALQGEEAF-MADAGLLKGKVDYRTWIDRSFYEAAI 337