Pairwise Alignments

Query, 448 a.a., putative membrane bound peptidase, nefD from Pseudomonas putida KT2440

Subject, 459 a.a., Membrane-bound serine protease (ClpP class) from Pseudomonas stutzeri RCH2

 Score =  534 bits (1375), Expect = e-156
 Identities = 280/446 (62%), Positives = 341/446 (76%), Gaps = 7/446 (1%)

Query: 10  LLLLLLGITPGGQAAPGAVWVLNIDDAIGPASADYLVRSLGQAQAQGAQLVVIRMDTPGG 69
           LL LL  +   G +A   V +L +D AIGPASADY++R L  A+ +GAQLVV+ +DTPGG
Sbjct: 9   LLFLLCALAVQGASAAAPVTLLRVDGAIGPASADYVLRGLEHARDEGAQLVVLELDTPGG 68

Query: 70  LDSAMRQMIKAILSSTVPVASYVAPSGARAASAGTYILYASHIAAMAPGTNLGAATPVRI 129
           LD +MR +IKAIL+S +PVA+YV PSGARAASAGTY+LYASH+AAMAPGTNLGAATPV+I
Sbjct: 69  LDVSMRAIIKAILASPIPVATYVTPSGARAASAGTYMLYASHVAAMAPGTNLGAATPVQI 128

Query: 130 GGA-PGTPSDDKAKGGDDET------LARKQVNDAAAYIRGLAQMRGRNADWAEKAVREA 182
           GG  PG P +      D++T      ++RKQ+NDAAAYIRGLAQ+R RNA+WAE+AVREA
Sbjct: 129 GGGMPGAPPEQPKGEKDEDTQKPADAMSRKQINDAAAYIRGLAQLRERNAEWAEQAVREA 188

Query: 183 VSLSASEALRLNVIDQVADDLPDLLRKLDGKTLQVAGQPRQLQTAGASVVEHLPDWRTRF 242
           VSLSASEAL L VID +A D+ DLLR+LDGKTL        L TA A ++EH PDWR R 
Sbjct: 189 VSLSASEALELEVIDYLARDVADLLRQLDGKTLATIAGDVSLNTADAQLIEHAPDWRVRL 248

Query: 243 LAVITNPSVALILIMIGVYGLLFEFMNPGSAVGGVVGGICLLLALYALQLLPVSFAGVAL 302
           LAVITNPSVALIL+MIG+YGL+ EF +PG   GGV+G ICL+LALYALQLLPV++AGVAL
Sbjct: 249 LAVITNPSVALILMMIGIYGLILEFSSPGMGGGGVLGCICLILALYALQLLPVNYAGVAL 308

Query: 303 ILLGITFMIAEAFLPSFGVVGFGGIVAFVVGALILIDTDAPGFGIPLALIGTLALLSALL 362
           ILLGI FM+AE FLPSFG++G GG+ AFV GA+ILIDTD PGFGIPL+LI  L ++SALL
Sbjct: 309 ILLGIAFMVAEGFLPSFGMLGIGGVAAFVTGAVILIDTDVPGFGIPLSLIVPLGIISALL 368

Query: 363 IGGVLGMALKARQRALVSGDAGLVGSLVTVTQVMASDPFCGVVLAQGEQWQVQCATPLQT 422
           +  ++ MALKAR++ LVSGD+ L+GSLV V  V   +P  G V   GE WQV+  T LQ 
Sbjct: 369 VFALVAMALKARRQRLVSGDSALIGSLVLVDAVPTQNPHSGWVHLHGENWQVRSTTALQV 428

Query: 423 GQNVRVTARHGVMLEVSAAAPATQGE 448
           GQ VRV AR G+ LEV+  +   + E
Sbjct: 429 GQQVRVIARDGLQLEVAPPSATNREE 454