Pairwise Alignments

Query, 636 a.a., putative of ABC superfamily informational factor: ATP-binding components from Pseudomonas putida KT2440

Subject, 618 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  456 bits (1173), Expect = e-132
 Identities = 261/629 (41%), Positives = 360/629 (57%), Gaps = 14/629 (2%)

Query: 1   MIRLSNLTLQRGPQRLLEGAEMTLHAGHKAGLIGANGAGKSSLFALLRGELSPDAGDCQL 60
           M+R+ +++     + LLE A   + +GHK GL+G NG GK++LF L+RGEL+ D G+  L
Sbjct: 1   MLRIDDISYSVEGRPLLEHASAVIPSGHKVGLVGRNGTGKTTLFRLIRGELTLDTGEITL 60

Query: 61  PGDWRIAHMRQEVDTLDRLAVDYVLDGDVRLRKVQAELAAAEQAHDGTALARLHSELESA 120
           P   RI  + QEV   +   ++ VL  D     + AE   AE A D   +A + + L   
Sbjct: 61  PRGARIGGVSQEVPGNEVSLLNTVLAADTERAGLMAE---AETATDPGRIAEIQTRLADI 117

Query: 121 DGYTADARARKLLAGLGFTNEQMDRRVGDFSGGWRMRLNLAQALMCPSDLLLLDEPTNHL 180
           D ++A+ARA  +L GLGFT  +  +    FSGGWRMR+ LA  L    DLLLLDEPTN+L
Sbjct: 118 DAWSAEARASSILRGLGFTEPETHQPCSAFSGGWRMRVALAAVLFSQPDLLLLDEPTNYL 177

Query: 181 DLDAILWLEDWLKGYPGTLLLISHDRDFLDAVVDHVLHVEQRKLNLYKGGYTAFERTRAE 240
           DL+  LWLE +L  YP T+L++SHDR  L+  V  +LH+E RKL  Y G Y  F R RAE
Sbjct: 178 DLEGALWLEAYLARYPHTVLIVSHDRGLLNRAVGGILHLEDRKLTFYTGPYDQFARQRAE 237

Query: 241 RLAQQQQAYEKQQAQRAHMEKYIARFKAQATKARQAQSRIKALERMEELSAAHVDSPFDF 300
           + A Q  A  KQ A+RAH+E ++ RFKA+A+KA+QAQSR+K LE+ME +      +   F
Sbjct: 238 KRALQAAAARKQDAKRAHLESFVNRFKAKASKAKQAQSRVKMLEKMETIRVPEDAARTVF 297

Query: 301 VFRESQKISSPLLSLSEGRLGYGDKAILDKVKLQLTPGARIGLLGPNGAGKSTLIKNLAG 360
            F   +++S P+++     +GY   A+L  + L++    RI LLG NG GKSTL K LAG
Sbjct: 298 TFPTPEELSPPIVATEGASVGYDGTAVLRGLSLRIDQDDRIALLGRNGEGKSTLSKLLAG 357

Query: 361 ELEPLSGRLVRGENLAVGYFAQHQLDSLDDKASPLLHLQRIAPTEREQTLRDFLGGFDFH 420
            LE + G L     L +G+FAQHQ+D L  + +PL HL R+ P E +  LR  L GF   
Sbjct: 358 RLEAMDGTLTASNKLRIGFFAQHQVDELRVEETPLQHLLRVRPDEGQARLRARLAGFGLM 417

Query: 421 GARCDEPVVNFSGGEKARLALALIAWERPNLLLLDEPTNHLDLEMRLALTMALQEFAGAV 480
            A+ +  V   SGG+KARL+L L   + P+LL+LDEPTNHLD+E R AL  AL  + GAV
Sbjct: 418 AAQAETEVGRLSGGQKARLSLLLATLDAPHLLILDEPTNHLDIESREALVEALTAYTGAV 477

Query: 481 VVVSHDRHLLKSTTDDFLLVADGKVDTFDGDLEDYSRWLVEYRQRSAPASTAPANPDKTD 540
           ++VSHD HLL    D   LV DG V  ++ DLE Y + L+   +   P     A P+   
Sbjct: 478 ILVSHDMHLLSLVADRLWLVKDGHVAPYEDDLEAYRQMLLTPDKPRKP----KAAPETAP 533

Query: 541 KKAQRQAAAALRQQLAPHKKAADKLETELNQVHAQLAEIETALGDGGLYDAARKDELRDL 600
           K+  R A  ALR +       A K E  + ++     ++   L D  LY+ A+  EL   
Sbjct: 534 KRPSRDAILALRAE-------ARKCEERVKKITEMQEKLSKKLADPALYEDAKAGELETW 586

Query: 601 LARQTKLKQREGELEEAWMEALETLESMQ 629
             +  ++       E  WM ALE LE  +
Sbjct: 587 NRKYAEVMDGLDRAEAMWMAALEKLEKAE 615