Pairwise Alignments

Query, 247 a.a., Positive alginate biosynthesis regulatory protein from Pseudomonas putida KT2440

Subject, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (262), Expect = 9e-28
 Identities = 81/247 (32%), Positives = 122/247 (49%), Gaps = 19/247 (7%)

Query: 4   LIVDDEPQGRERLTRLLGELEGYTVLEPSATNGDEALALIESLKPDVVLLDIGMPGLDGL 63
           ++ DDEP  R  L +LL EL     +  SA NG  AL  IE  +PDVV LDI MP +DG+
Sbjct: 9   VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDGI 68

Query: 64  QVAARLCEREAPPAVVFCSGDDEYGAEAFKDSTLSHVTKPFQAHALRDALRKAEKPNR-- 121
           +VA RL ++   P VVF +  DEY   AF+   + ++ KP  +  L     K ++  R  
Sbjct: 69  EVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRRN 128

Query: 122 -------AQLAALTRPANEGGGPRSHISARTRKG--IELIPLPQVIYFIADHKYVTLRHE 172
                  AQL +          P+  +  +  KG  I LI + +++Y  A+ KY++L   
Sbjct: 129 VAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLYKV 188

Query: 173 AG----EVLLDEPLKALEDEFG-ERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDG 227
            G    E LL   LK L  +    +F +IHR+ +V   +I+++ R   G   +++  L  
Sbjct: 189 HGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHIDRLQ- 247

Query: 228 DALTVSR 234
             L VSR
Sbjct: 248 --LPVSR 252