Pairwise Alignments

Query, 247 a.a., Positive alginate biosynthesis regulatory protein from Pseudomonas putida KT2440

Subject, 228 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 61.6 bits (148), Expect = 1e-14
 Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 16/215 (7%)

Query: 1   MNVLIVDDEPQGRERLTRLLGELEGYTVLEPSAT--NGDEALALIESLKPDVVLLDIGMP 58
           +N +IV+D P   ++L   + ++    +L+ + T  NG +A   ++S   D++ LDI M 
Sbjct: 2   INCIIVEDAPLAVDKLKNFISKVP---LLDLAGTFDNGLDAFDFLQSNTIDLLFLDIQME 58

Query: 59  GLDGLQVAARLCEREAPPAVVFCSGDDEYGAEAFKDSTLSHVTKPFQAHALRDALRKAEK 118
              GLQ+   L  R   P ++  S   EY  + F+     ++ KP+       A+ K + 
Sbjct: 59  QFTGLQLLQALHTR---PHIIIVSAYGEYAVQGFEYDVTDYLLKPYSFERFLKAVNKVQT 115

Query: 119 PNRAQLAALTRPANEGGGPRSHISARTRKGIELIPLPQVIYFIADHKYVTLRHEAGEVLL 178
              +   A  +P      P+ +I  +T   +  I L  ++Y      Y+ +  +   ++ 
Sbjct: 116 EMASNPPA--QPL-----PKDYIFLKTEYRMVRINLCDILYIEGKGAYLHVITDTTRIMT 168

Query: 179 DEPLKALEDEF-GERFVRIHRNALVARERIERLQR 212
               K +E     ++F+RIH++ L+A  +I+ ++R
Sbjct: 169 LLSFKEIESLLPAKQFIRIHKSYLIAINKIDNIER 203