Pairwise Alignments

Query, 472 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 500 a.a., multidrug transporter from Pseudomonas fluorescens FW300-N2E3

 Score =  236 bits (603), Expect = 1e-66
 Identities = 151/429 (35%), Positives = 216/429 (50%), Gaps = 5/429 (1%)

Query: 47  VVSAPVPEDWWQLYQDQRLNELVRQALSANTELRVAAANIAKARAQVEVAESQGGFNGGV 106
           V +  +PE WWQLY D +L+ LV+QAL  N +L  A A++    A +  A+++   +   
Sbjct: 52  VSAQALPERWWQLYNDPKLDALVQQALEHNRDLAAAQAHVQSMLAGIMQADAERWPSTQA 111

Query: 107 KLGAQRLQESGEAFLQPEKVPVANIGEAI---ISASYQFDLWGTFKRGTEAAKANADAVQ 163
            LGA   + + +  L       A    A       +YQ D+WG  +   E A+  A A Q
Sbjct: 112 SLGAAYGKTTDDQTLAKATDSHAPSQWAFNPGFELAYQVDIWGQVQHAIERAQVQAAAAQ 171

Query: 164 AAADTARITLVADVVKAYTQVCSANEEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVT 223
            A D  RIT+VA   +AY   C       + R SL++  QS+ L  R R AG   + +  
Sbjct: 172 DAEDLLRITIVAQTTRAYVNACVLGARAKVERHSLEVVGQSLALIDRQRQAGVVTDFEYV 231

Query: 224 RSQTQFKSLRAELPRFKAERETGMYTLAALLAKPVDQLPAGTADCAELPHLNQLVPVGDG 283
           R Q       A LP  +A R+  +Y LA L      +  +G A C  +P LN  +PVGDG
Sbjct: 232 RMQALQGETLALLPMLEARRQAALYELAMLTGVADLEQDSGAATCEVVPKLNAALPVGDG 291

Query: 284 AALLKRRPDVRQAERQLAAATAYIGVATGALYPDISIGAQVGTIG-ILENLGEPSTNRWG 342
             LL RRPD+RQAER L AA+  + +    LYP ++ GA V +       LG+ S   +G
Sbjct: 292 WQLLARRPDIRQAERVLQAASLQVDIVQADLYPKVTFGASVSSSSHTPHELGDSSAVMFG 351

Query: 343 FGPQISWSIPT-NGTRARIRMAEASTQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDA 401
            GP ISW  P     RAR+  A A  Q  +A F+  VL A++E +  LA Y     R  A
Sbjct: 352 IGPLISWQFPNWRVNRARVNQARALEQVDVAQFEASVLKALKEVRQALALYDGERQRHAA 411

Query: 402 LAEAEKSAKEAADQTHRYYQAGRESFLADLQATRTYTDMRAQLAAANSQVAQGQIAVFLA 461
           L++A  S+++A       Y AG   FL  L + R    ++A  A A+ ++ Q QIA+F A
Sbjct: 412 LSQALDSSRQAYKLAQLNYNAGSIDFLDVLDSERELIRLQATRADADGRLLQRQIALFSA 471

Query: 462 LGGGWKGTA 470
           LGGGW+ ++
Sbjct: 472 LGGGWQSSS 480