Pairwise Alignments

Query, 472 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 482 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Pseudomonas stutzeri RCH2

 Score =  241 bits (615), Expect = 4e-68
 Identities = 163/477 (34%), Positives = 252/477 (52%), Gaps = 20/477 (4%)

Query: 1   MKQLILAGLCLSLGACMMVGPDYEVPGDAAVQRNDLNGPLRQDADSVVSAPVPEDWWQLY 60
           MK   L+ L L+L AC  VGPDY  P     +   ++     D D    +     WWQ +
Sbjct: 1   MKFFALSLLSLALSACA-VGPDYRAPQPEPAR---ISQAASGDYDR---SRFEAAWWQQF 53

Query: 61  QDQRLNELVRQALSANTELRVAAANIAKARA-QVEVAESQ-GGFNGGVKLGAQRLQESG- 117
           +D  L+ LV +AL+ N ELR+A A +  ARA + +V+  +      G      + Q+ G 
Sbjct: 54  EDPTLDALVGEALAENRELRIAYARLRAARAIRDDVSNDRLPTVTAGASADIGKAQQPGV 113

Query: 118 -EAFLQPEKVPVANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVAD 176
            E  +  E+  +       +  +++ DL+G  +R  E+++A ADAV+A     +++L+A+
Sbjct: 114 TEQRVNAERYDLG------LDMAWELDLFGRIQRRLESSEAQADAVEAELYQLQVSLIAE 167

Query: 177 VVKAYTQVCSANEEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKSLRAEL 236
           +V AY Q+  A     IAR++L  Q  S +L ++LR+AG G E  V R+  +  +  A L
Sbjct: 168 LVDAYGQLRGAQLRERIARDNLANQRNSHELTEQLREAGVGSELDVLRADARLAATEASL 227

Query: 237 PRFKAERETGMYTLAALLAKPVDQLPAGTADCAELPHLNQLVPVGDGAALLKRRPDVRQA 296
           P+ +A++      +A LL +  DQL    A   +LP + + +P+GD   LL+RRPD+R A
Sbjct: 228 PQLRAQQARARNRIATLLGQRADQLAVDLAP-RDLPAIAKALPIGDPGELLRRRPDIRAA 286

Query: 297 ERQLAAATAYIGVATGALYPDISIGAQVGTI-GILENLGEPSTNRWGFGPQISW-SIPTN 354
           ERQLAAATA +GVAT  L+P +S+   +G I G    +G  +   WG  P ISW +    
Sbjct: 287 ERQLAAATADVGVATADLFPRVSLSGFLGFIAGRGSQIGSSAAQAWGVAPSISWAAFDLG 346

Query: 355 GTRARIRMAEASTQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSAKEAAD 414
             RAR+R AEA   AALA ++  VL A+ E++   + Y+    R  +L     +++ AA 
Sbjct: 347 SVRARLRGAEADADAALASYEHQVLLALEESENAFSDYANAQQRLLSLLRQSTASRAAAR 406

Query: 415 QTHRYYQAGRESFLADLQATRTYTDMRAQLAAANSQVAQGQIAVFLALGGGWKGTAK 471
           Q    Y+ G   FL  L A R         A A  ++ +G +A++ ALGGGW+ T K
Sbjct: 407 QAEIRYREGTADFLVLLDAERERLTAEDAQAQAEVELYRGVVALYKALGGGWEVTDK 463