Pairwise Alignments

Query, 472 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 465 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

 Score =  228 bits (581), Expect = 3e-64
 Identities = 153/481 (31%), Positives = 249/481 (51%), Gaps = 32/481 (6%)

Query: 2   KQLILAGLCLSLGACMMVGPDYEVPGDAAVQRNDLNGPLRQDADSVVSAPVPEDWWQLYQ 61
           K  I + L ++L AC  VGPDY+ P  A  +   L    + + D    + V   WWQ ++
Sbjct: 5   KVFIPSLLVMALAACA-VGPDYQAPVTAPAK---LASAAQGNYDR---SKVDRVWWQQFE 57

Query: 62  DQRLNELVRQALSANTELRVAAANIAKARA----------QVEVAESQGGFNGGVKLGAQ 111
           D  LN+LV ++L  N +LRVA A +  ARA           V  + +      G + G  
Sbjct: 58  DPTLNKLVARSLDGNRDLRVAFARLKSARAIRDDVANDVMPVVTSRASSDIGKGQQPGIT 117

Query: 112 RLQESGEAFLQPEKVPVANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARI 171
             + + E +         ++G   +  +++ DL+G  +R  EA+ A+ DA +A     ++
Sbjct: 118 ERRVNSERY---------DLG---LDMAWEVDLFGRIQRQLEASDADQDAAEANLYQLQV 165

Query: 172 TLVADVVKAYTQVCSANEEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKS 231
           TL+A+VV AY Q+  A     IAR++L  Q+ S  +  +LRDAG G+E  V R++ +  +
Sbjct: 166 TLIAEVVDAYGQLRGAQLREAIARDNLKNQQSSQDVTTQLRDAGVGNELDVVRAEARLAA 225

Query: 232 LRAELPRFKAERETGMYTLAALLAKPVDQLPAGTADCAELPHLNQLVPVGDGAALLKRRP 291
           + A +P+ +AE+      +A LL +  + L    +  ++LP + + +P+GD   +L+ RP
Sbjct: 226 VEASVPQLQAEQARQRNRIATLLGERPENLSVDLSP-SKLPAIAKALPIGDPTQVLRNRP 284

Query: 292 DVRQAERQLAAATAYIGVATGALYPDISIGAQVG-TIGILENLGEPSTNRWGFGPQISW- 349
           D+R AERQLAA+TA IGVAT  L+P +S+   +G T G    +G  +   W  GP I+W 
Sbjct: 285 DIRAAERQLAASTARIGVATADLFPRVSLSGFLGFTAGRGSQIGSSAARAWSLGPSITWA 344

Query: 350 SIPTNGTRARIRMAEASTQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSA 409
           +      RA+IR A+A  + ALA+++  VL A+ E++   + Y     R  +L     ++
Sbjct: 345 AFDLGSVRAQIRSADADAEGALANYEQQVLLALEESENAFSDYDKRQQRLVSLMRQSDAS 404

Query: 410 KEAADQTHRYYQAGRESFLADLQATRTYTDMRAQLAAANSQVAQGQIAVFLALGGGWKGT 469
           + AA      Y+ G   FL  L A R         A A  ++ +G +A++ ALGGGW+  
Sbjct: 405 RSAARLASVQYREGTADFLVLLDAERERLAAEDAQAQAEIELYRGIVAIYKALGGGWQPQ 464

Query: 470 A 470
           A
Sbjct: 465 A 465