Pairwise Alignments

Query, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

Subject, 286 a.a., Membrane fusion component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N1B4

 Score =  236 bits (602), Expect = 4e-67
 Identities = 124/281 (44%), Positives = 173/281 (61%), Gaps = 1/281 (0%)

Query: 10  RVVLTLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKVEVRDNQTV 69
           RV +TL +   A    + +  YYM  PWTRD  IRADV+ IAPDVSG +++++  DNQ V
Sbjct: 6   RVAITLSLTALAIFAGFHLWQYYMLTPWTRDARIRADVVVIAPDVSGWVRELKAFDNQQV 65

Query: 70  KRGDVLFTIDQDRFTLALRQAKATLGERQETLAQASREAQRNRKLG-NLVAAEQLEESQS 128
           K GDVL +ID+DRF  AL +A+A +  RQ+ L     EA R   LG   ++AE  E +Q 
Sbjct: 66  KAGDVLLSIDRDRFEAALEKAQAVVQTRQQQLGLREHEASRRASLGPQAISAELRENAQI 125

Query: 129 REARARSAVSEAQVAVDTAQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLSVVDSA 188
               AR  + EAQ     AQLNL RS V +P  G++ +       +V AG+PV++++D +
Sbjct: 126 NAGIARGELREAQAEAKVAQLNLTRSEVHAPRSGHVTNLRLAQGNYVNAGQPVMALIDDS 185

Query: 189 SYHVDGYFEETKLGGIHIGDAVDIRVMGDNTRLRGHVQSFAAGIEDRDRSSGANLLPNVN 248
           +++V  YFEETKL  I +GD V + +M     L+GHV+S + GI DR+ +    LL  V 
Sbjct: 186 TFYVQAYFEETKLPRIRVGDPVKVWLMSAGEALQGHVESISRGITDRNTTPDGQLLAEVE 245

Query: 249 PAFSWVRLAQRIPVRIAFDEVPQDFRMIAGRTATVSIIEGQ 289
           P F+WVRLAQRIPVRI  D +P+   + AG TA+V + EG+
Sbjct: 246 PTFNWVRLAQRIPVRIKLDTLPEGISLSAGMTASVQVQEGR 286