Pairwise Alignments

Query, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

Subject, 365 a.a., protein secretion protein from Sinorhizobium meliloti 1021

 Score =  114 bits (285), Expect = 3e-30
 Identities = 97/312 (31%), Positives = 143/312 (45%), Gaps = 67/312 (21%)

Query: 38  TRDGHIRADVIQIAPDVSGLIQKVEVRDNQTVKRGDVLFTIDQDRFTLALRQAKATLGE- 96
           T + ++R DV  +AP V+G +  VEV DNQ V+ GDVLF ID   +   L QA A +   
Sbjct: 58  TDNAYVRGDVTSLAPKVAGYVTAVEVEDNQAVRAGDVLFRIDDRDYRAKLAQAVANVEAA 117

Query: 97  ----------------------------------------------RQETLAQA---SRE 107
                                                         R ET++QA     +
Sbjct: 118 EARLTNVDAEMALQHALIRQAEAQRRSVVAELNLAAKAYDRRRELIRSETISQAHVDESD 177

Query: 108 AQRNRKLGNLVAAEQLEESQS---------REARARSAVSEAQVAVDTAQLNLDRSVVRS 158
           A ++R   N++AA    E+Q          REA A +AV++A+ A D A ++L+ +VVR+
Sbjct: 178 AAKSRAEANVLAASATVEAQQQRIAVLAAQREA-AVAAVAQAEAARDLAGIDLESTVVRA 236

Query: 159 PVDGYLNDRAPRNHEFVTAGRPVLSVVDSASYHVDGYFEETKLGGIHIGDAVDIRVMG-D 217
           PV G + +R  R    V  G  +L +V   +  +   F+ET+L  I  G    I + G  
Sbjct: 237 PVGGVIGNRQVRVGRLVAPGASLLDIVPLDNVWIVANFKETQLEHIRPGQRASITIDGYK 296

Query: 218 NTRLRGHVQSFAAGIEDRDRSSGANLLPNVNPAFSWVRLAQRIPVRIAFDEVPQDFRMIA 277
           +  L G V SFA G       S  +LLP  N   ++VR+ QR+PV+I F   P   R++ 
Sbjct: 297 SGALEGVVDSFAPG-----SGSAFSLLPADNATGNFVRVVQRVPVKIRFAGNPLSGRLLP 351

Query: 278 GRTATVSI-IEG 288
           G +A V I +EG
Sbjct: 352 GLSARVEIDLEG 363