Pairwise Alignments

Query, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

Subject, 285 a.a., HlyD family secretion protein from Rahnella sp. WP5

 Score =  219 bits (557), Expect = 7e-62
 Identities = 112/273 (41%), Positives = 169/273 (61%), Gaps = 1/273 (0%)

Query: 14  TLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKVEVRDNQTVKRGD 73
           T+LV   A    W M  YYM +PWTRDG +RA+++ I P+VSG I ++ + DNQ VK GD
Sbjct: 11  TVLVFAVAICAGWWMWNYYMQSPWTRDGKVRAEIVNITPEVSGRIIEINIHDNQFVKSGD 70

Query: 74  VLFTIDQDRFTLALRQAKATLGERQETLAQASREAQRNRKLG-NLVAAEQLEESQSREAR 132
            LF++D   F +A+  A+A + +    LA+AS EA+R R LG N+++AE L+ES      
Sbjct: 71  PLFSLDPVPFKIAVDNAEAAVAKAAADLAKASHEARRRRGLGTNVISAESLDESNISAKA 130

Query: 133 ARSAVSEAQVAVDTAQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLSVVDSASYHV 192
            ++A   AQ +++ A+ NL ++ + +P DGY+ +   R   + T+G P++ +VD  S+++
Sbjct: 131 MQAAYQAAQASLEQAKWNLSKTTIVAPTDGYITNLQTRRGNYATSGTPLVGLVDIHSFYI 190

Query: 193 DGYFEETKLGGIHIGDAVDIRVMGDNTRLRGHVQSFAAGIEDRDRSSGANLLPNVNPAFS 252
            GYFEETKL  I  G+  DI +   N  L+G V+S    I D+   +  +LL NV P   
Sbjct: 191 LGYFEETKLKNIREGNMADITLFNGNIPLQGRVESIGRAIYDQSLDAPEDLLMNVKPNVP 250

Query: 253 WVRLAQRIPVRIAFDEVPQDFRMIAGRTATVSI 285
           WVRLAQR+PVRI  + VP+   ++AG T T++I
Sbjct: 251 WVRLAQRVPVRIQLENVPEHVVLVAGTTCTIAI 283