Pairwise Alignments

Query, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

Subject, 343 a.a., multidrug transporter subunit MdtN from Klebsiella michiganensis M5al

 Score =  124 bits (311), Expect = 3e-33
 Identities = 103/340 (30%), Positives = 165/340 (48%), Gaps = 64/340 (18%)

Query: 2   KKPLLTLGRVVLTLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKV 61
           K P   L  ++L LL V    V++W++      AP T D +  AD I + P+VSG I ++
Sbjct: 7   KIPRNKLPALLLVLLAVVVLLVVIWRLDS----APATNDAYASADTIDVVPEVSGRIVEL 62

Query: 62  EVRDNQTVKRGDVLFTIDQDRFTLALRQAKATLG--ERQETLAQASREAQRN-------- 111
            V DNQ VK+GD+LF ID   + + L +A+A+L   ++Q  L Q S +AQ+         
Sbjct: 63  AVSDNQQVKQGDLLFRIDPRTYEMNLAKAEASLAALDKQIMLTQRSVDAQKYGADSVQAT 122

Query: 112 ---------------RKLGNL-----VAAEQLEESQSREA--------------RARSAV 137
                          R+   L     V+AE ++ +++ +               +A SAV
Sbjct: 123 VAKARAAAKQASDTLRRTEPLLKEGFVSAEDVDRARTAQRAAAADLNAVLLQAQQAASAV 182

Query: 138 S------------EAQVAVDTAQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLSVV 185
           S            EA +A+   +L+L+ + VR+P DG +        +F +A RP+ +++
Sbjct: 183 SGIDALVAQRVAVEADIAL--TKLHLEMATVRAPFDGRVVALKTSIGQFASAMRPLFTLI 240

Query: 186 DSASYHVDGYFEETKLGGIHIGDAVDIRVMGDNTR-LRGHVQSFAAGIEDRDRSSGANLL 244
           D+  ++V   F ET+L  IH G    IR+M D+ +   G V S   G+   D       L
Sbjct: 241 DTRHWYVIANFRETELKNIHTGTPATIRLMSDSGKTFAGKVDSVGYGVLPDDGGLVLGGL 300

Query: 245 PNVNPAFSWVRLAQRIPVRIAFDEVPQD-FRMIAGRTATV 283
           P V+ + +WVR+AQR PV+I  D+   + FR+ A   AT+
Sbjct: 301 PRVSRSINWVRVAQRFPVKIMVDKPDAEMFRIGASAVATL 340