Pairwise Alignments

Query, 718 a.a., Toxin secretion ATP-binding protein from Pseudomonas putida KT2440

Subject, 1000 a.a., cyclic nucleotide-binding domain (cNMP-BD) protein from Synechococcus elongatus PCC 7942

 Score =  338 bits (867), Expect = 8e-97
 Identities = 201/646 (31%), Positives = 340/646 (52%), Gaps = 13/646 (2%)

Query: 67  LQGRLLQRKLEQIPSIAMPAMLLLKEGRSAVLLGWENDDTARLLLSESDGGEVHVSREAL 126
           L+ ++LQ +L  +P + +PA++  +EG + +       D   +  ++   G + +S    
Sbjct: 348 LRSQILQLRLVDLPRVPLPALIAWEEGHAVLYAV----DATSITFADPRQGLITLSLAEF 403

Query: 127 LSDY--SGRVFFAQPQHKFDVNHGNLIPRAKSWFRDTLLRSKWLYIDAIAASLVINLIAL 184
              +  +G +  A            L     SWF  ++ R +   I+ + ASLV+ L  L
Sbjct: 404 QQRWGNAGTILLATKTQFTQSQRFGL-----SWFWPSIQRYRVRLIEVLIASLVVQLFTL 458

Query: 185 AAPLFVMNVYDRVVPNQATSTLWVLAIGIAGAYIFDLILKGLRGLCLDLAGKKTDLIISA 244
           A PL +  V D+V+   + + L   A+ +    +F  +L  LR         + DL + +
Sbjct: 459 ANPLIIQQVIDKVIGQGSLNNLNSFAVLLVILGVFQGLLSSLRTYLFADTTNRIDLKLGS 518

Query: 245 TLFERIVGMSMKYRPAR-VGSFAQNIHEFQGLRDFLASLTLTSLIDLPFTILILIVIAII 303
            + +R++ + ++Y   R VG  +  + E + +R FL    LT+++D  F+++ ++V+ + 
Sbjct: 519 DIIDRLLKLPLRYFERRPVGELSSRVQELEKIRSFLTGTALTTVMDAMFSVIYILVMLVY 578

Query: 304 GGHLVWIPIIAFPLALGIGYALQRPLMATMERTMALASERQSSLIETLAGLDAVKVNNAE 363
              L  + +   P+ + I +     +   +       +E QS L+E L+G+  VK  N E
Sbjct: 579 SWFLTLVALSTVPIFVAITFFASPVVRRQLREKAERNAETQSQLVEVLSGIQTVKAQNIE 638

Query: 364 SERQYMWEQTLGTLSRLELRVKVLSSLAMNITLLIQQLAGVAMICVGVYLIIDGNLSMGG 423
            + ++ W++          R    S+ A ++T    QL+G+ ++ VGVYL+ D  LS+G 
Sbjct: 639 LKARWQWQERYARYIAAGFRNINTSTAASSLTNFFNQLSGLLVLWVGVYLVFDNQLSLGQ 698

Query: 424 LVACYMLSGRALGPLGQLNGLLARYQQAKVTMVSTDHMMDLPQERNFEER-PLSRKVLQG 482
           L+A  ++SG    PL +L  L   +Q+  +++     ++D PQE + +++  +   ++ G
Sbjct: 699 LIAFRIISGYVTQPLLRLAQLWQNFQETALSLERLADIVDTPQESDDDDQGKIPMPMING 758

Query: 483 SVEFRGVDFTYPNQQNLALKNINLTIRPGEKVGIIGRSGSGKSSLAKLIVGLYEADGGSL 542
            VEFR + F +  Q  L L N+ L I  GE VGI+G+SGSGKS+L KL+  LY    G +
Sbjct: 759 KVEFRNLSFRFGEQGPLQLSNVTLEIPAGEYVGIVGQSGSGKSTLMKLLPRLYSPLEGEI 818

Query: 543 LVDGVDIRQIDVSELRHNIGYVPQDIQLLAGTLRDNLVSGARYIEDELILQAAELAGVHE 602
           L+DG DI ++++  LR  IG VPQD  L  GT+ +N+         + I+ AA+ AG H+
Sbjct: 819 LIDGYDISKVELYSLRRQIGIVPQDSLLFQGTVEENISLTKPNATTDEIITAAKAAGAHD 878

Query: 603 FARLHPDGYELQVGERGQNLSGGQRQNVALGRALLLNPQILLLDEPTSAMDNTGEERLKQ 662
           F    P GY  +VGERG  LSGGQRQ +A+ R +L NPQ+L+LDE TSA+D   E ++  
Sbjct: 879 FIMTLPLGYNTRVGERGGALSGGQRQRIAIARTVLQNPQLLILDEATSALDYDTERQVSI 938

Query: 663 RLQAVVEGKTVLLVTHRASLLSLVDRLIVIDRGQIVADGPKAAVMD 708
            LQ    GKTV  +THR S +   DR+IV+D+G +V  G    +M+
Sbjct: 939 NLQQHFRGKTVFFITHRLSTVRHADRIIVMDKGAMVEQGSHDELME 984